Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0059 |
Symbol | |
ID | 6087665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 66852 |
End bp | 68036 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641595118 |
Product | monosaccharide-transporting ATPase |
Protein accession | YP_001718826 |
Protein GI | 170022321 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4214] ABC-type xylose transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACAAG CTAATCAATC TGAATTTAAC TCACCAGAAA ATGGGGATAA AAAGCCATTT TTTCGGCTTA AATCCTTAAA TTTACAAGTT TTTGTCATGC TGGCCGCGAT CGCCATTATT ATGTTGTTCT TCACCTTCAC GACAGAAGGG GCCTACCTCA GCGCCAGAAA TATCTCTAAC TTGCTGCGCC AGACGGCGAT CACCGGCATC TTGGCGGTCG GTATGGTGTT TGTCATTATC TCCGCTGAAA TTGACTTGTC TGTTGGCTCA ATGATGGGGT TATTGGGTGG CATAGCGGCC ATTTTTGATG TCTGGCTCGG CTGGCCGTTG CCGCTGACCA TTGTCGTTAC GCTGGCGCTG GGGCTGGTAT TAGGGGCATG GAACGGTTGG TGGGTCGCGT ATCGCAAAGT GCCTTCGTTT ATTGTTACGC TCGCGGGCAT GTTGGCTTTT CGTGGCATTT TAATTGGTAT CACCAATGGC ACGACGGTTT CGCCGACCAG TAATGCGATG TCGCAGATTG GCCAGAGCTA TCTGCCAAGT GGCATTGGTT TTGGCATCGG TGCTATTGGC CTGATGTTGT TTGTGGCCTG GCAATGGCGT CGGCGTAATC ACCGCATCCG CTTGGGGTTA CCGGTTGCCG CCCCGCAAGG GGATGTGACT CGCCAAACTA TTACCGCAGT TATCGTTCTG GGTGCCATAT ATTTATTGAA TGATTATCGT GGTGTACCTA CGCCGGTACT AATCCTTACT GCATTAATGC TGGCGGGGGT ATTTATGGCT ACTCGCACCG CTTTTGGTCG CCGGACCTAC GCTATTGGCG GCAATATTGA TGCGGCGCGC CTGTCTGGAA TTAATGTAGA GCGCACTAAA CTGGCAGTAT TCGCGATTAA CGGACTGATG GTGGCGATGG CTGGTTTGAT CCTCAGTTCA CGTTTAGGCG CAGGTTCGCC TTCTGCGGGC AATATCGCTG AACTGGATGC GATTGCGGCG TGTGTCATTG GCGGTACCAG CCTGGCCGGA GGCGTTGGCA GTGTGGCGGG GGCCGTAATG GGCGCATTTA TTATGGCTTC TCTCGATAAT GGGATGAGCA TGCTAGATGT GCCGACGTTC TGGCAGTACA TTGTCAAAGG CGCAATTTTG CTGCTGGCCG TGTGGATGGA TTCCGCCACC AAACGGCGGG TGTGA
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Protein sequence | MSQANQSEFN SPENGDKKPF FRLKSLNLQV FVMLAAIAII MLFFTFTTEG AYLSARNISN LLRQTAITGI LAVGMVFVII SAEIDLSVGS MMGLLGGIAA IFDVWLGWPL PLTIVVTLAL GLVLGAWNGW WVAYRKVPSF IVTLAGMLAF RGILIGITNG TTVSPTSNAM SQIGQSYLPS GIGFGIGAIG LMLFVAWQWR RRNHRIRLGL PVAAPQGDVT RQTITAVIVL GAIYLLNDYR GVPTPVLILT ALMLAGVFMA TRTAFGRRTY AIGGNIDAAR LSGINVERTK LAVFAINGLM VAMAGLILSS RLGAGSPSAG NIAELDAIAA CVIGGTSLAG GVGSVAGAVM GAFIMASLDN GMSMLDVPTF WQYIVKGAIL LLAVWMDSAT KRRV
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