Gene YPK_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0012 
Symbol 
ID6089946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp12664 
End bp13128 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content49% 
IMG OID641595071 
Productheat shock chaperone IbpB 
Protein accessionYP_001718779 
Protein GI170022274 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAATT ATGATTTGTC ACCTTTACTT CGTCAGTGGA TTGGCTTTGA TAAATTGGCC 
AGTACAATGC AGGGCGGTCA GGAGCCACAA GGCTTCCCTC CTTATAACAT TGAAAAAACT
GACGATAACC ACTATCGCAT ATCACTGGCG CTAGCCGGGT TTAAACAGAG CGAATTAGAT
ATTGAAGTCG AAGGCCCACG CCTGACAGTA CGTGGTAAGC CAACACCAGT GGAGAAACAG
GTCGAATACC TGCATCAAGG GCTGGTTCGT AAAGAGTTCT CGTTGACCTT TACCTTGGCT
GAGCATCTGA ACGTTGATAA TGCCCAGTTT GAAAATGGCC TGCTGCATAT TGATTTACTG
CGTCAGGTGC CAGAAGCACT GCAACCACAG CGTATTGCCA TCGGCAGTGC CACACCTCAG
GAGCGCCAGG TATTAGAAAG CCCGGAGGCA CCTGATCAGC AGTAA
 
Protein sequence
MRNYDLSPLL RQWIGFDKLA STMQGGQEPQ GFPPYNIEKT DDNHYRISLA LAGFKQSELD 
IEVEGPRLTV RGKPTPVEKQ VEYLHQGLVR KEFSLTFTLA EHLNVDNAQF ENGLLHIDLL
RQVPEALQPQ RIAIGSATPQ ERQVLESPEA PDQQ