Gene Daud_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_2024 
Symbol 
ID6026195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp2129525 
End bp2130265 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content65% 
IMG OID641594845 
Productglutamate synthase alpha subunit 
Protein accessionYP_001718146 
Protein GI169832164 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0070] Glutamate synthase domain 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCAGA TTGACGCCCG CGGTGTGCAT TACCGGCAGC TCAACCAGTG GATCCGGGAG 
GCGATCAGGG CCGGGGAAAC TGACTTCCGG CTGGAAAACG TAAACGGCCA GCGGTACATC
GGTACCGGGT TGGAAGTCCC CGACGTGCGC ATCGTAATCA ACGGCGTGCC GGGAAACGAC
CTGGCCGCTT TTATGAACGG TCCGGCGATC ACGGTCCGGG GCAACGCGCA GGACGGGGTG
TGCAACACCA TGAATTCGGG GACGGTGGTG GTCCACGGCA GCGCGGGGGA CGTTCTTGGG
TACGGGATGC GCGGGGGCAG ACTGTTCATC CGCGGGAACG TGGGCTACCG GGTGGGCATC
CACATGAAGG AATACAAGGA CTTGGTGCCC GTGATCGTGG TTGGGGGCAC GGCGGGCGCC
TTTTTCGGGG AATACATGGC CGGCGGCCGC CTGGTGCTCC TGGGATTGGA CCGGGCTGAG
GGCGAACCCC TAGCCGGGGA TTACCTGGGG ACCGGCATGC ACGGCGGGGT GATCTATCTC
CGGGGCCGGC CGGAAGAGCA CACCCTGGGC AAAGAAGTAA AACTCTTTGA ACTGGACGAG
GCGGATCGGC GGTTTCTGGA TCCGCTCCTG GACGAGTTCT GCCGGCACTT CGGGCGGGAC
CCCGCCGGAG TCCGGGCCGC CGAATTCCAC AAGCTGATTC CGGTGTCACA CCGCCCGTAC
GGGCGGCTGT ACACCCATTA G
 
Protein sequence
MLQIDARGVH YRQLNQWIRE AIRAGETDFR LENVNGQRYI GTGLEVPDVR IVINGVPGND 
LAAFMNGPAI TVRGNAQDGV CNTMNSGTVV VHGSAGDVLG YGMRGGRLFI RGNVGYRVGI
HMKEYKDLVP VIVVGGTAGA FFGEYMAGGR LVLLGLDRAE GEPLAGDYLG TGMHGGVIYL
RGRPEEHTLG KEVKLFELDE ADRRFLDPLL DEFCRHFGRD PAGVRAAEFH KLIPVSHRPY
GRLYTH