| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1912 |
|---|
| Symbol | |
|---|
| ID | 6026623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 2016598 |
|---|
| End bp | 2017188 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641594730 |
|---|
| Product | putative prophage repressor |
|---|
| Protein accession | YP_001718037 |
|---|
| Protein GI | 169832055 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
|---|
| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGGAG TAGGAGAAAC CATCAGGCGC CTGCGCGAGG AATCGGGGCT GAGCCAGCGC
GCACTCGCGC GGAAGGCCGG GCTGTCGTCC CAGTACTTGA GCGACATTGA GGTCGGTCGC
ACCTCACCCA GCCTGAAAAG CCTGGAGAAA CTGGCCGGTG CCCTGCAGGT CGCGCCGGGA
CAATTGCTGC AGGGGCAGGA CCGGTTCTCC AGCCAAGTGG TCGAAGTCCC GGTCCTGGGC
CGCGTCCCGG CCGGAGGCCC TGTTGTCTCC GAGGAAGTAA TCCTGGATTA CCTGCCGCTT
CCCCGCAAGC TGGCTTCGGA GGACACCTTT TGCTTGGAGG TCCGGGGGGA AAGCATGCAA
GACCTCGGCA TCGACAGCGG GGACTACGTC CTGGTGCGGC TCCAGCCCAC CGCCGAAAAC
GGCCAGGTCG TGATCGCCAG GGTGGAGGGC GAGGTCACCT GCAAGCGGTA CTACCGCACC
GACCGGGTGG TCTCCCTGGA ACCGGCCAAC CGCCGGTTTC GCCCCCTCCG GCTGGAGGCC
GGGGAGATCG AAATTGTTGG GGTTGTAACA AATGTAATCA AAAGGGTATA G
|
|---|
| Protein sequence | MPGVGETIRR LREESGLSQR ALARKAGLSS QYLSDIEVGR TSPSLKSLEK LAGALQVAPG
QLLQGQDRFS SQVVEVPVLG RVPAGGPVVS EEVILDYLPL PRKLASEDTF CLEVRGESMQ
DLGIDSGDYV LVRLQPTAEN GQVVIARVEG EVTCKRYYRT DRVVSLEPAN RRFRPLRLEA
GEIEIVGVVT NVIKRV
|
|---|
| |