| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1805 |
|---|
| Symbol | |
|---|
| ID | 6027668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1894461 |
|---|
| End bp | 1896740 |
|---|
| Gene Length | 2280 bp |
|---|
| Protein Length | 759 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641594622 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001717933 |
|---|
| Protein GI | 169831951 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAAAA ACGGTAACCG GGGAGGTTTG GTGGTGTTCG AATGGCGTGA CGGCTTTACC
GGAAGAAGAT ATGGTTTCAC CAAGGAACAG CAGGACGCCG CGCGGCGGCT GGTAGCCGGG
CTCTTGGAGG CAAAACTGAA AAAAGAGGTC GGCGATGACC TGCGGGCGCT GGCCGATGCG
GCCGCCGCGT TCTGGGCGCG GGATTATTAC CGTTTGGTTT TTCCCCTGGC GTTCGGCCGG
GAAGTGGTCG ATGGCGGAGT GCGGGCCGTG TTTTTGGACG ACCCCGGTGA CCGGGTGGAT
CAGACGGCGG TTTTCCGGAG AGCCCCGCTC GACGGCGCGG CCCGGCCACC CCTGTTGCCG
GCGGGCGGGC GGGCGCCGGC CGAGTATCTC TTAGCCGACG TGGTGCTGGT GCGGGCGGCC
CTCGCGAATA TTTACTGCCG TCAGCGAGGT GTGGATCCCG GGCTTTTGCA CGTGCTGCGG
CTCGCCTGTT TCACAGGGCC GTTGGCCGCC GAGTTGGCCG CCTCTGGTTT TGACCTGCCG
GAGGAGGTAC GCCGCCTGGT GGATTTCCTG GAAGGCGACG GGGAACCGCC GGCGGAGCTG
GATGCAGAGG ATCTGCGCCG ACTCTGGGAG GCGGGGGCGG TAGCCGCGGA GGAGGCGATG
GACATAGCAC CCGCCTCCTT CGCGGTCACC GTGGTGGTCG GGGCGGTGCA GCGCGTTAAG
CAGTACGTCT TTGAGACGCC GGGGTTGAAC GAGATCCGGG GCGGTTCCGA GATACTGAGC
GACGTAACGG AGCGGCTGGC CGTGGACGTC GCCACGGAAC TGGGCGCCGA GGTGGTGCTG
CGGGCCGCCG GATCCCACCT GGAATTCTTG GTACCGGACG CCGAGACCGG TGCGGCGTGG
GAGGCGCGCC TGCGGCGGGA GTTTGTCGCG GCCACGGGGG GCGTGTTGGT GGCGGCGGCG
GCCGAAACGT TGCCGGTGCG GGACCTGCTC GGCGATTACT ACCGGGCGAT GGGCCGGGTG
TACCAACGGT TGGAGGCGGC TCGCAACCAG ACGCGCCCAC TATATCCGGA AACCCTGCCG
TTTGAGGAGC GGTGCGCCAT TTGCGGCCAG CGGGCCGCCG AAGGGTGGTA CCAGCCGCCG
GAGGGCGACG CGGAGCCGAT CTGCCGGGTC TGCCTGATTA AAAGGGAGTG GGGGCGTGAC
GCCCGGCGGG ATAAAACCAG GGAACTGGAG GAGCAGCTCC GGGGCGGCGG GCGCGCTCTC
TGGGGGCTCG GTGCGGACGC CGGACTCCCA CAGTCTTTGG ACGACCTGAT CGTGGGCCAC
CCGCGCCGCC GCCTGGTGGC GGTGGTGTAC GGGGACGGCA ACAACTTTGG CGCCGTGGTG
CAGCAGCTGA AGAACATCGC CGTGGCGCGG CAGTGGACCT GCCGGGTGGA GGCGGTGACC
TGGAGCGCGA CCGCCCTCGC CCTGGCCGAA GCGGTGCGGG TGAGCGTACC CGCTCCGCAT
GCGGCGGCGA AAGAGGCACA GCGGAAGCCG TCGTTACCTT TCCAAGTGCT CGCCCTGGGT
GGGGAGGACA TCGGTCTCTT TGCCTGGGGG CCGGTTGGGC TACGCTTTGC CGAGCGTTTC
GTGGCGTTGA CCGACCGGGA GTTTACCCCG GCACCGGGCC ACGACGGCGC CCGGATCTGC
TTTTCCCTGG GGGTGCTGGT TGCCGATGCC AAAGCGGCGG TGGCGCGCAC CGTGGCCTTT
AGCGAGGGGG AGTTGCTGAA GTGGGCCAAG CGGGCGGCGC GGAACGCCGG GTACCGGGAC
GGGGGTACGA TCGCCTTCCT GGTGGTGCCG ACAGCCGACC AGATCCCCGG CGATCTCGAC
GATTTCCAGC AGACCATGTA CTACCGGGAG GGGGCGACCT TCCCGGTGTG CCTGACTCTG
CGTCCGGTCA CGGCCGCGGA ACTGGGGTTT TTGCTTGACC GGGCCGCGCG TTTACGGGAA
GCGGGTTTCG TTGGCGCGCT TGGCCGAATG GCGGCGGCCT TCGTCCGGGG CGAGCCGCGC
GTGGCCGTGC TCTATTACCT TTACCAGAAG GCCCGCGAAC GCAAGGGCCG CGACGACGGG
GGTTTTACCG CGCTTTTGGA GGACACACGC GAGCGGCCGC CGACACTGGC CGACCTTGAC
TTCGCCGGCC GGGTGCTCGG TACGCGGCGA CCTTTCGGCG GTGAACCGGT CGCCGGCGGG
CGCGAAACCT ACTTTGCGCC GCTGGTGGAT CTGGCGGAAC TGGTCAAGGT TCTGGAATAA
|
|---|
| Protein sequence | MSKNGNRGGL VVFEWRDGFT GRRYGFTKEQ QDAARRLVAG LLEAKLKKEV GDDLRALADA
AAAFWARDYY RLVFPLAFGR EVVDGGVRAV FLDDPGDRVD QTAVFRRAPL DGAARPPLLP
AGGRAPAEYL LADVVLVRAA LANIYCRQRG VDPGLLHVLR LACFTGPLAA ELAASGFDLP
EEVRRLVDFL EGDGEPPAEL DAEDLRRLWE AGAVAAEEAM DIAPASFAVT VVVGAVQRVK
QYVFETPGLN EIRGGSEILS DVTERLAVDV ATELGAEVVL RAAGSHLEFL VPDAETGAAW
EARLRREFVA ATGGVLVAAA AETLPVRDLL GDYYRAMGRV YQRLEAARNQ TRPLYPETLP
FEERCAICGQ RAAEGWYQPP EGDAEPICRV CLIKREWGRD ARRDKTRELE EQLRGGGRAL
WGLGADAGLP QSLDDLIVGH PRRRLVAVVY GDGNNFGAVV QQLKNIAVAR QWTCRVEAVT
WSATALALAE AVRVSVPAPH AAAKEAQRKP SLPFQVLALG GEDIGLFAWG PVGLRFAERF
VALTDREFTP APGHDGARIC FSLGVLVADA KAAVARTVAF SEGELLKWAK RAARNAGYRD
GGTIAFLVVP TADQIPGDLD DFQQTMYYRE GATFPVCLTL RPVTAAELGF LLDRAARLRE
AGFVGALGRM AAAFVRGEPR VAVLYYLYQK ARERKGRDDG GFTALLEDTR ERPPTLADLD
FAGRVLGTRR PFGGEPVAGG RETYFAPLVD LAELVKVLE
|
|---|
| |