Gene Daud_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1787 
Symbol 
ID6025387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1878169 
End bp1879101 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content64% 
IMG OID641594604 
Productflagellar hook-associated protein 3 
Protein accessionYP_001717915 
Protein GI169831933 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGATCA GCACCCACTT ATTCTACAAG AACCTCCTGA GCAGTATTCA CCGGGAGCAT 
CTCGGCGCTG CCCGGGTCCA GGAGCAGATC GCCAGCGGGC GGCGGATCAA CCGCCTGAGC
GAGGACCCGG CGGCCCTGAG CCAGGTCCTG TCACTGCGTA CCGCCACCAG TGAGATCCGG
GACTATGTCC TGAGCATCGA CCTGCAAAGG TCGCGCTTAA ACCGCGCCGA AGAGGCGCTC
GCTCAGGCGA CGCAAGTGAT GCAGGACGCC CGGGTGATGG CCGTCCAGGG CGCCACCGGC
ACCTATTCTC CTTCCGACCT GAAGAACCTG GCCTTTGAGG TCGACCGGAT GATCACTGCC
CTGGTCGGTT TCGCGAACGC GTCCCGCGGG GGTGTCAAGC CGGAGGGGCT GTTCGAAAGA
ACCGTTGTGG ATGGACAGGA AATGGTCGTC TACACTCCGC CCGAAGTATG GCTTGAACAG
GTCACCGGAG AGGGTTGGGG CCGGGTGCTG ACCCTGAACA AGCTCGTGGA GACCATCGAT
CCGGGCCAAG TGTTCCAGGT CGAGGCGATG AAGGACGAGG GCGGCAACCC CGTACTGCGC
GCCACCATGT TCGACGCCCT GTTCGACTTG CGTGACCGCC TGATGGCGGG CGAGCAGAGC
GGGGTGGCGG GCCTGATCGG CGTCCTCGAA GGCCACATCG ACACCCTGTT GCAGGGCCGC
GGTGACCTGG GCAGCCGCGG CTACCAGTTG GAGAAGCTCC AGGCCCAGAT CCAGATCCAG
AACGAGCAGT TGACCGAGGT GCTGTCCAAG ATCGGGGACA CGGACGTGGC TGAGGCCGTG
ATCCGGATCA ACCGGCACGA ACTGGTGCTC CAGGCCACCC TGTCCACCGC GGCCCGGCTG
ATGCACGTCA GCCTGCTCAA CTACCTGCGC TAA
 
Protein sequence
MRISTHLFYK NLLSSIHREH LGAARVQEQI ASGRRINRLS EDPAALSQVL SLRTATSEIR 
DYVLSIDLQR SRLNRAEEAL AQATQVMQDA RVMAVQGATG TYSPSDLKNL AFEVDRMITA
LVGFANASRG GVKPEGLFER TVVDGQEMVV YTPPEVWLEQ VTGEGWGRVL TLNKLVETID
PGQVFQVEAM KDEGGNPVLR ATMFDALFDL RDRLMAGEQS GVAGLIGVLE GHIDTLLQGR
GDLGSRGYQL EKLQAQIQIQ NEQLTEVLSK IGDTDVAEAV IRINRHELVL QATLSTAARL
MHVSLLNYLR