Gene Daud_1649 details

Gene Information

• Locus tag: Daud_1649
• ID: 6027192
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: -
• Start bp: 1738813
• End bp: 1739223
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 641594471
• Product: hydrogenase expression/synthesis, HypA
• Protein accession: YP_001717782
• Protein GI: 169831800
• COG category: [R] General function prediction only
• COG ID: [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)
• TIGRFAM ID: [TIGR00100] hydrogenase nickel insertion protein HypA

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCACGAAG TGGGACTGAT CCAGACGGTG ATGAATGAGA TTTCCCAGGT GGCCGCCCGG 
AGCAACATCA CGCGGGTGAC CAAGGTGCGC CTGGTGGTCG GGCGCTTGAA CGGCGCGCTG 
CCCGACGTGC TGGAGTTCGC GTTTACGGTC TTGACTCCGG AAACGATATT CGCGGGCGCC 
CAACTGGAGA TCGAGACGGT GCCGATCACC CTGGAGTGCG AGCACTGCGG CGCCCGGACG 
GTGACGGACG AGCTGGCCTA CTTCTGCCCG GAGTGCAGCG GGCGCGCCCG CATCACCGGC 
GGGCGGGAAC TGTACATAGA CTTTTTCGAA GGTGATGATG GAAAGGAAGA TGAACGTGAA 
GGTGGTAATG GCCCAGAAGA TCCTGCGGGC GAACGAGCAG GTGGCCCGTG A 

 

Protein sequence

MHEVGLIQTV MNEISQVAAR SNITRVTKVR LVVGRLNGAL PDVLEFAFTV LTPETIFAGA 
QLEIETVPIT LECEHCGART VTDELAYFCP ECSGRARITG GRELYIDFFE GDDGKEDERE 
GGNGPEDPAG ERAGGP