Gene Daud_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1506 
Symbol 
ID6026311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1589371 
End bp1590132 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content67% 
IMG OID641594330 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001717644 
Protein GI169831662 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGTTA CGGTACTGGG GTGTTGGGCC CCCTACCCGC GGGCCGGGGG CGCCTGTTCG 
GGCTACCTGT TGCGGGACCG GGAGACCCTG GTGCTGCTGG AAGCGGGGAA CGGCAGTTTC
AGCCGTCTGG CTGCGGCAGT CGATTTCCGC GCCTTGTCGG CCGTTGTCGT CTCCCATTTT
CACCTTGACC ACTGCGCCGA CCTCTTCTGC CTGCGGCACG CGCTGAAGGG CGCCAGGAGG
GACGGCAGCC GCGCGGAACC GCTGACTCTG TTCGTGCCGC AAGAGCCTCG GGGTGAATTT
GAGCGCCTAG CCGGGGACAA TGAAGCCTTC ACGGTCCGGA CGATCGAGAG TCTCCCCCGG
AAAGGGGACC GGAGAGTCGC CATCGCCGGG AGCCTGGAGA TTGAGTTTCT GCCCACGCGC
CATTCTTCCC CCGGATACGG GGTGGCGGTC AGCGGCAGTG CGCGGGGGTG CTTCGTTTAC
TCGGGAGACA CCGCCTACTT TCCGGAACTG GCCCGTCACT GGGCAGGGGC GGGGCTCTTG
CTGTGTGAGG CCACGGGCTT GGCACGCGAC AGCGCCCAGC TGAAGGCGGT ACACCTCACC
TCCGTCCAAG CCGGGGAGTT GGCCCGGGCA AGTGGGGCCG CACGCCTGGT TTTGACCCAC
TTCTGGCCGG AATACGACCC GGCGGTGCTG GCGGCGGAGG CTGCAGATGC TTTTGGAGGG
CCGGTGCTGG CGGCGCGCGA GGGTGAGACG TACAGCATAT GA
 
Protein sequence
MDVTVLGCWA PYPRAGGACS GYLLRDRETL VLLEAGNGSF SRLAAAVDFR ALSAVVVSHF 
HLDHCADLFC LRHALKGARR DGSRAEPLTL FVPQEPRGEF ERLAGDNEAF TVRTIESLPR
KGDRRVAIAG SLEIEFLPTR HSSPGYGVAV SGSARGCFVY SGDTAYFPEL ARHWAGAGLL
LCEATGLARD SAQLKAVHLT SVQAGELARA SGAARLVLTH FWPEYDPAVL AAEAADAFGG
PVLAAREGET YSI