Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1457 |
Symbol | |
ID | 6025925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 1540381 |
End bp | 1541106 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641594275 |
Product | peptidase M23B |
Protein accession | YP_001717595 |
Protein GI | 169831613 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAGACTGT TCACGCGCGA GAAGAGGCTG GATTGGCCTC TGCCACCGGC CGCTCCCAGG TCACGGGCGG GCCGGAGCCA ACAAAAATGG TTTTTCCGGG TGACGGCGGC GGTAGTTCTG TTCCTGGTTT TTCTGGCCAT CCGGGAGACC CAGGTACCGC TGGGGGTTCA GGTCCGGGAA GGACTGCAGT ACGTTTTGAC TACGGAATGG AACTACCAAC CGGTGGTGGA CCGGGTGGTC CGCCTGGGAT TGCAGACGGT AAGCGTCGAT CTTCCGTTCC TGGACACCGT ACCGCAGCGG CCGGACGGGG ACACCGAGAT GGTGACGGTA CCGGCGAACG GGCTCTTGCC CCCCGTCCCC GGTACCGTGG TGCGCGAATT CGGCTGGGTG GTCGACCCGG TGGACAACCG GGAGCGTTTC CATCCCGGAG TGGATATCAG CGCGCCCGCC GGCACACCGG TCCGGGCGGT CATGTCTGGA TTGGTATCGC AGGTGGGGGA AAATCCGACT TACGGGCCCT ATGTTCTTAT CGACCATGGC AGTGAAGTTT ACACCCTGTA CGCCCAACTG CAGAACATCC AGGTGCGCAA GGCCGACCGG GTTGAAGCAG GCCGGGTTCT GGCTGAGGTC GGCAACAAAG GCGACTTTCC GGGACCGGGT GTGCACTTCG AGTTCCGTGA GCAGGGGGCA CTGGTTAATC CCCTGGAGAA AATCACCTTC CCCTAA
|
Protein sequence | MRLFTREKRL DWPLPPAAPR SRAGRSQQKW FFRVTAAVVL FLVFLAIRET QVPLGVQVRE GLQYVLTTEW NYQPVVDRVV RLGLQTVSVD LPFLDTVPQR PDGDTEMVTV PANGLLPPVP GTVVREFGWV VDPVDNRERF HPGVDISAPA GTPVRAVMSG LVSQVGENPT YGPYVLIDHG SEVYTLYAQL QNIQVRKADR VEAGRVLAEV GNKGDFPGPG VHFEFREQGA LVNPLEKITF P
|
| |