Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1337 |
Symbol | |
ID | 6026867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 1410984 |
End bp | 1412756 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641594152 |
Product | hydrogenase, Fe-only |
Protein accession | YP_001717478 |
Protein GI | 169831496 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGTTA CTCTGACCAT AGATGGCCGG CCCGTGACGG TTGAACCGGG GACCACCGTG CTGGACGCGG CCCGGCAGTT GGGCATTGCC ATCCCGACCC TCTGCTACCT GAAGCAGTTG AACCACCGGG CCGGGGCCTG TCGCATGTGC ATCGTGGAGG TCGAGGGTGC CCGGACATAC CTGGCCTCCT GCACCCTGCC GGCCACCGAA GGGATGGTGG TGCGGACCGG CACGCCCGGC GTCCGGGAGG CCCGACGGAT GATCCTAGAG CTGATGCTCT CCGACCACCC GAACGAGTGC CTGCTCTGCA TCCGGAGCGG CAGTTGTGAA CTGCAGGCGG CCGCGAACCT GATGGGCCTC CGGGAGATCC GGTTCCAGCG GATGTCCCGG ACCCTTTACA AGAAGGACGA CTCCAGCCCG GCGATTATCC GGGAGCCCCA GAAGTGCATT TACTGCCGGC GCTGCGTCAC GGTCTGCGCC GAAGTGCAGA CGGTGCACGC CATCGGGCCG CAGCTGCGGG GCTTTGCCAC GGTGATCGCG CCCCCTTACA ACCTGCCCCT GGGCGATTCG GTTTGCGTAC ACTGCGGACA GTGCGCGCTG GTGTGCCCCG TGGGCGCTAT CTACGAGCGT GACGACACTG GGGCCGTCTG GGCGGCGCTG GCCGACCCCG CCAAACACGT GGTGGTGCAG ACCGCGCCCG CAACCCGGGT TACACTGGGC GAGGCGTTCG GCTTGCCCCC GGGCACGCCG GTGACCGGCA AGATGGTGGC CGCCCTGCGC CGGCTCGGTT TCGACCGGGT GTTCGACACG GACTTCACGG CGGACCTGAC CATTGTCGAG GAAGGGAACG AGTTGATCCA CCGCCTCACC AAAGGCGGCC CGCTGCCGAT GATCACGTCC TGCAGCCCGG GGTGGATCAA GTTCATCGAG CATTTCTATC CCGAGTTCCT GCCGCACCTG TCCACCGCCA AGTCGCCGCA GCAGATGTTC GGGGCGCTGG CCAAGACCTA CTATGCGGAA CAGGCCGGGA TCGACCCGAA GGATATGGTG GTGGTCTCGA TCATGCCCTG CACCGCCAAG AAATTCGAGG CGGGCCGGCC GGAGATGAAC GCCAGCGGCT ACCGGGACGT GGACATGGTG CTCACTACCC GGGAACTGGT CCGGATGCTC CACGAGGCGT GCATCGACCT GAACAATATG CCGGATGAGG AGTACGACCG CCCCATGGGC CTCTCCACGG GCGCCGGGGC CATCTTTGGC GCCACGGGTG GGGTGATGGA GGCGGCGCTG CGCACAGCCT ACGAACTGCT CACCGGGAAA CCTTTACCCG GAATCGACAT CGAGGTGGTG CGCGGGCTGG ACGGTGTCCG GCAGGCGGCC ATCGACCTGG AGGGCAACCC CGTCAGGGTG ATGGTGGCCC ACGGTCTGGG TCACGCCCGG ATGTTGATGG AGAAGCTGAA GGCTGGCGAG TTGAAGGACT GCCACTTCAT CGAGGTGATG GCTTGTCCCG GCGGCTGCAT CGGCGGGGGC GGCCAGCCGA TCTGTGCCAA TCCCGATGTC CGGCAGCGGC GCGCCGCCGG GATCTACCGC CTGGACAAGG GGATGAAGCT GCGCAAGTCC CACGAGAACC CGGCCATCAT CGAGCTGTAC GAACGGTTCC TGGGCGAACC GCTGGGCGAA AAATCGCACA AGCTTTTGCA TACCAGCTAC ACGCCGCGGT CGGCCCACCC GGAGTTGGCG AGAGCGAGTA GTCCAGCTCC CCAAGTCAGG TAA
|
Protein sequence | MAVTLTIDGR PVTVEPGTTV LDAARQLGIA IPTLCYLKQL NHRAGACRMC IVEVEGARTY LASCTLPATE GMVVRTGTPG VREARRMILE LMLSDHPNEC LLCIRSGSCE LQAAANLMGL REIRFQRMSR TLYKKDDSSP AIIREPQKCI YCRRCVTVCA EVQTVHAIGP QLRGFATVIA PPYNLPLGDS VCVHCGQCAL VCPVGAIYER DDTGAVWAAL ADPAKHVVVQ TAPATRVTLG EAFGLPPGTP VTGKMVAALR RLGFDRVFDT DFTADLTIVE EGNELIHRLT KGGPLPMITS CSPGWIKFIE HFYPEFLPHL STAKSPQQMF GALAKTYYAE QAGIDPKDMV VVSIMPCTAK KFEAGRPEMN ASGYRDVDMV LTTRELVRML HEACIDLNNM PDEEYDRPMG LSTGAGAIFG ATGGVMEAAL RTAYELLTGK PLPGIDIEVV RGLDGVRQAA IDLEGNPVRV MVAHGLGHAR MLMEKLKAGE LKDCHFIEVM ACPGGCIGGG GQPICANPDV RQRRAAGIYR LDKGMKLRKS HENPAIIELY ERFLGEPLGE KSHKLLHTSY TPRSAHPELA RASSPAPQVR
|
| |