Gene Daud_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1288 
Symbol 
ID6026783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1361087 
End bp1361407 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content60% 
IMG OID641594105 
ProductCRISPR-associated Cas2 family protein 
Protein accessionYP_001717431 
Protein GI169831449 
COG category[L] Replication, recombination and repair 
COG ID[COG1343] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGACGC TGGTGTCCTA CGATATCGTG GAAGACAAGG TCCGGCGCAA GGTGTTTGAG 
GCCTGCAAAG ATTACGGCCT GACGAACGTG CAGTACTCGC TTTTCTTCGG CGATATGACC
CATAACCGCC GCGAAGAACT GTTTCAGCGG CTCCGGAGGA TTATCGGGCG CCAGGAGGGG
AAGGTGCTGA TCTGCCCAGT CTGTGACAAG GACCTGCGCC TTTCGAAGGC CATTGAGGTG
TCCGCAGGGA TGCCTGAAGA GGCCGCGGAG GCCGCCGTGT CGTACCCCGG ACGAAGCCGA
AAGAAGGCAC GGGCCGGATG A
 
Protein sequence
MKTLVSYDIV EDKVRRKVFE ACKDYGLTNV QYSLFFGDMT HNRREELFQR LRRIIGRQEG 
KVLICPVCDK DLRLSKAIEV SAGMPEEAAE AAVSYPGRSR KKARAG