Gene Daud_1157 details

Gene Information

• Locus tag: Daud_1157
• ID: 6027398
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: -
• Start bp: 1212807
• End bp: 1213247
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 641593972
• Product: hypothetical protein
• Protein accession: YP_001717300
• Protein GI: 169831318
• COG category: [R] General function prediction only
• COG ID: [COG1569] Predicted nucleic acid-binding protein, contains PIN domain
• TIGRFAM ID: [TIGR00305] probable toxin-antitoxin system toxin component, PIN family

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0851306
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGCAC GCCCGCGGAT TGTGGTCGAC ACGAATATTG TGATGGGCGG CCTTATCAAC 
CCCCGTCGGT CCTCATCCGG TCGGGTGGTG GGCCTGTGGC TCGAAGACCG GGTGGAGGTG 
CTCGTCAGCC CGGAAATCCG GGGCGAGTAC CTGGACATCG CCTCCAAGAT GAGATTCGGG 
CGGCGCGAGG CCGTTGAGGA ACGCGAACAA AAGCTGAAGC GCCTTCTGGC CAACGCCCGC 
ACCGTGGAGC CCGGGATCCG TCTCGACTGT GTGCCCGGAG ACCCGGCCGA TAACCGGTTC 
CTGGAGTGCG CCGTCGCGGG CCGAGCCGAC TGCATCCTGA CCCAGGACCG GCACCTCCTC 
ACCCTGGCCG AGTTCCAGGG GGTGCGGATC TTAACAGCCG GCGATTTCAT CCGCGAATAC 
GGGCAAGGAG AGGGGTCTTG A 

 

Protein sequence

MTARPRIVVD TNIVMGGLIN PRRSSSGRVV GLWLEDRVEV LVSPEIRGEY LDIASKMRFG 
RREAVEEREQ KLKRLLANAR TVEPGIRLDC VPGDPADNRF LECAVAGRAD CILTQDRHLL 
TLAEFQGVRI LTAGDFIREY GQGEGS