| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1146 |
|---|
| Symbol | |
|---|
| ID | 6025948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 1200837 |
|---|
| End bp | 1203200 |
|---|
| Gene Length | 2364 bp |
|---|
| Protein Length | 787 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641593961 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001717289 |
|---|
| Protein GI | 169831307 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTTGC GCAAACTGCT CCGGGACATC GCTACCTTCA AGGGACAGTT CTTCGCTATT
GCGCTGTTGG TGATGCTGGG CATCGCCATG TTCTCCTCCA TGTACCTGGC GCTGGTCAAC
CTGCGGGACT CCGCGGAAAA CAGCTTCCAC CGGCTGCGCT TGGCCGACTA CACCGTGCAC
TTCACCGCCG CCCCCGCCGG CCTGACCGAG GCAGCCCGCG CCATCGAGGG TGTGCGCCTG
GTCAGCGGGC GGTACGTGGA CGACGTCTCC CTGGACCTCC CGGGCGCCCC CGACAAAATG
CGGGCCCGGA TCATCTCCCT GCCCGGCCCC GGCGAGGACC CGGTGAACGA CCTGCACTTG
GTCCGCGGCC GCCTTCTGGA CCCCGACGAC CGTCGCGGCG TCCTCATTTC CAGCGACTTC
GCCACGCATC ACCAACTGGA ACCGGGCGAC CCGGTGCACG TCATCGTTGG GGGCCTGCGC
CAGGAACTGG TGATCCGGGG CCTAATCTTG AGCCCGGAGT ACCTTTTCGC CGCCCCCGAC
CTGAACCAGT TCTTTTCGTC GATCCATTCG TTCGCGATTA TGTTCGTGAC CCGCGACACG
GCGGCTGAAG TCCTGGGCAG CGGCGGCCAG ATCAACGAAC TTGCCGTGAC CACCGATCCG
GAAGCGGACG CGGACGCGGT CGAACAGGCC CTGCGTGAAC TGACTTCCGG TTACGGCTAC
CGGACTCTGG TCGCGCGCGA AGACCAGTTC AGCTACCGTA TGCTTCAGAG CGAGATGGAC
CAGCTTTCAA CCTGGTCGGT GATGCTGCCC GTCGTGTTTC TGGGTGCCGC CGTGATGGTC
ATTCTGGTGC TCCTGGCGCG GATCGTCCGG CAGCAGCGCT CCCATATCGG GCTCCTCCGG
GCGCTGGGAT ACACCCGGGC GCACATCATG GGCTACTACC TGGGATTCGC CCTGGCCGTC
GGGGGCACTG GTTCGGTGGC CGGGACGCTC CTCGGCTACT GGATGTCGGT CGGCTTGACC
AATCAGTACG CCTTTTACTT CAACATCCCC TACCTGGTGA GCGGGTTCCA CTGGGACGTG
CAACTGTTTG CCGTGACCCT GGGCGTCGGC ACCTGCCTCG TCGCCTCCTT TTTCTCGGCC
CGGGCGGCCG CTTCCATCCA CCCGGTGGAG GCCATGCGCG CCCCCGCTCC CCCGCCGGGC
CGCCGCTTCT GGGGCGAACG CTGGTTCAGT TTCATGGACC GGCTGCCAGC CCTCTGGAAG
TTTCCGATTC GGAACATCAC CCGCAATCCC TGGCGGTTCA ACTTCTCGGC CACCGGCGTG
GGCGTGGCGT TGGGCTTGCT GGTGCTATCC GGTTCCTTCT ATGACCTGTT TGACGACATG
CTCAACCGCT ACTTCGGCGA TATGGTGGGC TATGAGGCCC GCATCAACTT CACCGGGCCG
ACCGGTTGGG ACGCTGTGAC CGAGGTGGCC CTCTGGCCCG AGGTGCGCGA GGCCCAAGCC
CTGGTGGAGG GAGCGGTGCG CTACCGCAAC GGGCGCCTGC AGTACGAAGG CCCCCTCACC
GGCCTGCCGG AGGACGGTCG CCTTTTCCAG TTGCGGGATG AGCAGAACAA CCTGGTCGCC
CCGTCCCGCG GCGGGATACT CCTGTCTTCG AACTTGATGC AAATACTGGA CCTGAAGGAA
GGGGACACCG TCACCCTGGA ACCAATGGTC GCCGGGCTGC CCAGCCGTGA AGTCACGGTC
GCCGGCACGG TCGAGACAAT GCTGGGCGTC GGCGGCTTTC TGCCGCTAGA GGAGGCCCGT
TTTGTGCTAG GACCGGGCAC GCCTATCTCC GCGGCGCTGG TGACCACTAA TCCCGGCACC
AGCCTGGAAA CGCTCCGCGA ACGTGCCCGG GACCGCCCGT TCGTCAGCGG AGTGCAAAGC
ATCGCCGATG CGCGCGAGGA GGCGTTGAAG AATCTGGACC TGATGTACGC CTTCCTGGCC
GTGGCGCTGC TTTTCAGCAT GCTTCTGGCG GGCGCCATCG TGTACAGCAT GTCCTCCATC
ACCACGTTGG AACGCACGCG TGAACTGGTG AGTTTCCGCA TGCAGGGCAT GAGCCGGAAG
GGTACCGGCG TGCTGATCGC CGCCGAGGGT CTGCTGCCCG CTGTCCCCGG CCTGGTCCTG
GGCGTCGCCG TAGGCTACGC CTGGGCCGCC TGGTTTGCCG CCGCCTTTTC CAGCGACCTG
ATGACCATCC GGTTGGTTAT CTACCCGGCC ACGATCGTGT TTTCCGTGCT GGCCGTCGTC
GCGGCGGTGG CGCTGGCCCA GTGCCCGCCG ATCCGGAGCA CAAACCGCAT CAATCTGGCC
GAAGCCTCGA AACACCGGGA ATAG
|
|---|
| Protein sequence | MLLRKLLRDI ATFKGQFFAI ALLVMLGIAM FSSMYLALVN LRDSAENSFH RLRLADYTVH
FTAAPAGLTE AARAIEGVRL VSGRYVDDVS LDLPGAPDKM RARIISLPGP GEDPVNDLHL
VRGRLLDPDD RRGVLISSDF ATHHQLEPGD PVHVIVGGLR QELVIRGLIL SPEYLFAAPD
LNQFFSSIHS FAIMFVTRDT AAEVLGSGGQ INELAVTTDP EADADAVEQA LRELTSGYGY
RTLVAREDQF SYRMLQSEMD QLSTWSVMLP VVFLGAAVMV ILVLLARIVR QQRSHIGLLR
ALGYTRAHIM GYYLGFALAV GGTGSVAGTL LGYWMSVGLT NQYAFYFNIP YLVSGFHWDV
QLFAVTLGVG TCLVASFFSA RAAASIHPVE AMRAPAPPPG RRFWGERWFS FMDRLPALWK
FPIRNITRNP WRFNFSATGV GVALGLLVLS GSFYDLFDDM LNRYFGDMVG YEARINFTGP
TGWDAVTEVA LWPEVREAQA LVEGAVRYRN GRLQYEGPLT GLPEDGRLFQ LRDEQNNLVA
PSRGGILLSS NLMQILDLKE GDTVTLEPMV AGLPSREVTV AGTVETMLGV GGFLPLEEAR
FVLGPGTPIS AALVTTNPGT SLETLRERAR DRPFVSGVQS IADAREEALK NLDLMYAFLA
VALLFSMLLA GAIVYSMSSI TTLERTRELV SFRMQGMSRK GTGVLIAAEG LLPAVPGLVL
GVAVGYAWAA WFAAAFSSDL MTIRLVIYPA TIVFSVLAVV AAVALAQCPP IRSTNRINLA
EASKHRE
|
|---|
| |