Gene Daud_0973 details

Gene Information

• Locus tag: Daud_0973
• ID: 6026521
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: +
• Start bp: 1030245
• End bp: 1030715
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 641593785
• Product: hypothetical protein
• Protein accession: YP_001717117
• Protein GI: 169831135
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4966] Tfp pilus assembly protein PilW
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATACGGT TGAGGCTTTG CGACGGACAA CGCGGCTTTA CACTGATAGA ACTGCTGATC 
GCATCACTTA TCCTGGTGCT CGTCCTGACC GTGGCTCAGA TGCTCCTTTT TGAGGCCCTG 
GTTTCCTGGC AGAAGGGCGA AGCCCGCCAG GAGGTGCGGG AGAATCTGCG ACGAGGCCTA 
GACCGCATGT CCCGCGAACT GCGTGCGGCC CAGGGACTGA CGGGGGGCTG TGACGAGGGG 
CGGCTGGTGT TCGTCAATAC CGACGGCAAT ACGGTGACGT ACTATGCAAA TGAAGAACGG 
CAGCTGGTCC GCGAGGTGGA CGGGACGACC ATAGTAGTTG CCAGGGGGAT CAGTGAAGCC 
CGGTTTTCTT ATCACGAGTC CGGCCGGGTG GCCATACGCC TGCGGGGCGA TGCCGAAGGG 
ACCAGTCTCG AACTGACGAC AAGCGTAACC CTGCGGGAAA CGACCGGGTG A 

 

Protein sequence

MIRLRLCDGQ RGFTLIELLI ASLILVLVLT VAQMLLFEAL VSWQKGEARQ EVRENLRRGL 
DRMSRELRAA QGLTGGCDEG RLVFVNTDGN TVTYYANEER QLVREVDGTT IVVARGISEA 
RFSYHESGRV AIRLRGDAEG TSLELTTSVT LRETTG