| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0970 |
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| Symbol | |
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| ID | 6027063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 1027908 |
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| End bp | 1029161 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641593782 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001717114 |
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| Protein GI | 169831132 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAAAA AACGGCTCGG AGGCAAGATC GGGAAAGTGA AAGGCCGTAA GTTCAGGTAC
AAGGCCCGGA ATGAGTCCGG GAGACTGGTG GGGGGCACCA TCACCGCGGA AAGCGAAACC
GCCGCCCGGG CCCGTTTGAG GGAGCGCCGG TACTTCGTGG TGGAACTCAA GCCGGCGCCG
CAAGCCGGGG GTTCATCGTT CGCGGCGCTG ACCGCGCCGA AGGTGACGGC CAGGGACCTG
GCCGTATTCT GCCGCCAGCT GGCCACCATG GTCCAGGCCG GAATGCCGCT CCTGACCTGT
TTGAACGTAC TCGGGCAGCA GAGTGACAAC AAGACCCTGC GCCTGACGGC GGCGTCGGTG
GCCATGGCTG TGGAAGCGGG GAATACCCTT TCGGAAGCGC TACGCGCCTT TCCCAAGATC
TTCCCCGAAC TCTTTGTCAC GATGGTCGAG GCCGGAGAAA CGGGCGGCGC ACTCGAGGAG
GTGCTGGAGC GCCTGGCCAC CCAACTGGAG AAGGATGCGG ACATCAGGGC CAAGGTGAAG
TCGGCCATGA GTTACCCCCT GGTGATTTTG GCCGTGGCTC TGGCAGCCAT TTCCATCATC
CTGATCTTTG TGCTCCCGAC CTTTACGGAG ATGCTGACTT CTATGAACCT GCCCTTGCCT
GTACCGACCC TGCTGGTGAT CGGGCTCAGC GACTTCCTGC GGGGGTACTG GTACCTGGTG
CTGCTGTCGT TGGCCGGGGC CGTCTTCGCA CTGCGGCAAT ACGCACGCAC CAAGAATGGG
CGGCGGGCCG TCGACCGGCT GATACTCCGG CTGCCGGTCT TCGGCACGCT GATCAGGAAA
ATGATCATCG CCCGGGTGAA CCGGACCTTG AGTTCTCTGG TACGGAGCGG AGTGCCCCTG
CTGCAGTCCC TGGCCATTGT CCGCCGTATT GCCGGCAACC AGATCGTGGC CGAGGCCATT
CTGAGCGCCG AAAACAGCGT CAAGGAGGGC GAAGGGCTGG CGAAGCCGCT GGAGAGAAGC
AGGGTTTTCC CGCCGATGGT TACCCGGATG ATCGCCATCG GCGAGGACAC CGGCGCCCTG
GACAACCTCC TGGACCGGGT GGCCCAGTTC TACGAGCGGG AGGTCGACGC GACCGTGTCC
CGGCTTTCCA GCATCCTGGA GCCCCTCTTG ATGGTTTTCT TCGGGCTGGT CGTCGGTTTC
ATCCTGCTCG CGGTTTACCT GCCCATGTTC AGCGTTGTTG CCGGGATAAG CTAG
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| Protein sequence | MLKKRLGGKI GKVKGRKFRY KARNESGRLV GGTITAESET AARARLRERR YFVVELKPAP
QAGGSSFAAL TAPKVTARDL AVFCRQLATM VQAGMPLLTC LNVLGQQSDN KTLRLTAASV
AMAVEAGNTL SEALRAFPKI FPELFVTMVE AGETGGALEE VLERLATQLE KDADIRAKVK
SAMSYPLVIL AVALAAISII LIFVLPTFTE MLTSMNLPLP VPTLLVIGLS DFLRGYWYLV
LLSLAGAVFA LRQYARTKNG RRAVDRLILR LPVFGTLIRK MIIARVNRTL SSLVRSGVPL
LQSLAIVRRI AGNQIVAEAI LSAENSVKEG EGLAKPLERS RVFPPMVTRM IAIGEDTGAL
DNLLDRVAQF YEREVDATVS RLSSILEPLL MVFFGLVVGF ILLAVYLPMF SVVAGIS
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