| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0682 |
|---|
| Symbol | |
|---|
| ID | 6025942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 719446 |
|---|
| End bp | 720078 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641593511 |
|---|
| Product | exopolysaccharide synthesis, ExoD |
|---|
| Protein accession | YP_001716848 |
|---|
| Protein GI | 169830866 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3932] Uncharacterized ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATAAGC TTTCACAAAA AATTGCCGAT GTTTTTTCCC GGCACTCTAG TGACGGGGTG
ACGCTGGGGC AGTTGCTGGA CACGATGGGC AAACAGGGAG CGGGTTTTCT ACTGGCCCTA
TTGGCTTTGC CGTTGCTGGT ACCGTTGCCG CCGGGCATGG GTTCACCTGT TGCTATCCTA
CTGCTTGTGT GGTCTTTCCA GCGCCTGCTT GGTGTAGGCG TGCCCTGGTG TCCTGAATTT
TTGCGAAGCA AGCGCCTGCC AGCCCAAGTA GTAGAGAAGC TAACGAGCAG GGGGATACCC
CTCATCCAAC GGCTTGAAAG GCAAAGTAGC AGAAACGGGC CACAGATGAG CGAAACAGCA
GTGAAAGCAG CCTGTCTTGT CGTCATCATA ATGTCCATGT TAATTATTTT ACCGACACCT
TTCTTAAACC CGTTCTTTGC TTTTGTTATT CTGCTTCTTG GCGTCAGCAT GACTAGCGCT
AACATCAGGC TTTTCGCTGC TGGAATTATT GTAGGGACGG TGACTGTCTT GTTGCTGTTG
TCGGTCTTGT TTGCCGCCGC TTCGGAGGGG GAAAACTTCA TTAAAGAAAA GGATGGAGCT
TCCCGGGGGT GGACAAATGC GCTGCGAGGG TGA
|
|---|
| Protein sequence | MHKLSQKIAD VFSRHSSDGV TLGQLLDTMG KQGAGFLLAL LALPLLVPLP PGMGSPVAIL
LLVWSFQRLL GVGVPWCPEF LRSKRLPAQV VEKLTSRGIP LIQRLERQSS RNGPQMSETA
VKAACLVVII MSMLIILPTP FLNPFFAFVI LLLGVSMTSA NIRLFAAGII VGTVTVLLLL
SVLFAAASEG ENFIKEKDGA SRGWTNALRG
|
|---|
| |