Gene Daud_0609 details

Gene Information

• Locus tag: Daud_0609
• ID: 6026971
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: +
• Start bp: 646517
• End bp: 647041
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 641593438
• Product: ribosome recycling factor
• Protein accession: YP_001716775
• Protein GI: 169830793
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0233] Ribosome recycling factor
• TIGRFAM ID: [TIGR00496] ribosome recycling factor

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000570491
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGAAAA CGATTGAAGT GCTCGATAGG GAATTTGCCT CCTTGCGGGC CGGACGGGCC 
ACGCCGGCCC TGTTGGACCG GATCACGGTT GACTATTACG GTTCGACGAT ACCCATAAAC 
CAACTGGCGA CGGTTTCGGT ACCGGAGGCG CGTCTGCTGG TGATCCAGCC CTGGGACAAA 
AGCGCCATCG GCGAGATTGA GCGGGCGATT CTAAAATCGG ATCTGGGGAT CACTCCTTCC 
TCCGACGGGA ACATTATCCG TCTGGCTGTG CCCCAGCTGA CCGAGGAGCG GCGCCGGGAC 
CTGGTGAAGT TTTTGAAAAA GCGGGGCGAA GAGGCCAAAG TAGCCGTTCG GAACATCCGC 
CGGGACGTCA TTGAACGTTT GAAAGCGCTG CAAAAAGAAG GCGGGGGATT CTCCGAAGAC 
GACCTGCGCC GGGAGCAGGA CGAAGCCCAG AAGTTGACCG ACCGGTATGT CAAGGAAATC 
GACCGGATTG TGGCGGCCAA AGAGAAAGAG GTCATGGAGA TCTGA 

 

Protein sequence

MMKTIEVLDR EFASLRAGRA TPALLDRITV DYYGSTIPIN QLATVSVPEA RLLVIQPWDK 
SAIGEIERAI LKSDLGITPS SDGNIIRLAV PQLTEERRRD LVKFLKKRGE EAKVAVRNIR 
RDVIERLKAL QKEGGGFSED DLRREQDEAQ KLTDRYVKEI DRIVAAKEKE VMEI