Gene Daud_0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0336 
Symbol 
ID6025720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand+ 
Start bp358605 
End bp359282 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content69% 
IMG OID641593188 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001716526 
Protein GI169830544 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0310124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATCG AACTCATTTT TGCCACTTCC TTCGTCGTCG GCCTGACCGG GGCGATGATG 
CCGGGACCCC TGCTGACCCT GACGGTGGCG GAGTCCGCCC GGCACGGATT CCGGGCGGGG 
CCGCTCTTAG TCCTGGGGCA CGGCATCCTG GAGGCCGCGC TGATCGTGGC CCTGACCGCC 
GGACTGGCCG CCGTCCTGGT CCGGGCGGAG GTAACCGCCG CGATCGCCGT CATCGGCGGC 
GCCTTTCTGA TCTGGATGGG GTATTCCATC GCCCGGGACG CCCTCCGGGG GCGGGTGCAG 
CTGGCCGTGG CTGCGGGCGG CAACCCGGGG GCCGCCGCGG GAACCGCTGC CGTGCCGGCC 
TTGCCGCGTC TGGTGGGCCT CGGAATCGCC ACCAGCCTGT CCAACCCTTA CTTCACCCTC 
TGGTGGGCCA CCATCGGCCT CGGCTACATT ACCCTCTCCC TGGAGCGGGG TCCGGCCGGC 
CTGACCGCCT TTTTCACCGG CCACATCCTG GCCGACCTGG CCTGGTACAG CCTGGTGGCG 
GCGGCGGTCG CCGGGAGCGG TCGTTTCCTG ACGCCCCGGA TTTACCGCGG CATCCTGGCG 
GTGTGTGGAT CCTTCCTGGT CACGCTGGGC GGCTATTTCA TCTGGAGCGG GCTGGTAAGA 
AACCTGTGGC TGGGATAG
 
Protein sequence
MTIELIFATS FVVGLTGAMM PGPLLTLTVA ESARHGFRAG PLLVLGHGIL EAALIVALTA 
GLAAVLVRAE VTAAIAVIGG AFLIWMGYSI ARDALRGRVQ LAVAAGGNPG AAAGTAAVPA 
LPRLVGLGIA TSLSNPYFTL WWATIGLGYI TLSLERGPAG LTAFFTGHIL ADLAWYSLVA 
AAVAGSGRFL TPRIYRGILA VCGSFLVTLG GYFIWSGLVR NLWLG