Gene Daud_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0037 
Symbol 
ID6027372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp43986 
End bp45002 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content65% 
IMG OID641592891 
ProductDNA polymerase III, delta prime subunit 
Protein accessionYP_001716238 
Protein GI169830256 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.418255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGACG GGATCATCGG GCAGGAACTG GCCAAGAGGT ATTTTCAAAG AGCGGTTGAG 
GGCGGCTGCC TGGCACATGC CTACCTGTTT CACGGTCCGG CGGGTGTCGG CAAGAAAAGC
CTGGCCCGGG CGCTCGCCCA AGCCCTGGTC TGCAACACCG CGGAAAACAA TTCTTGCGGT
CTGTGTCCCG CCTGCCGGAT GTTTCTGGCC GGCTCCCATC CCGACCTTCG GGTTCTGGAC
GGCGCGGAAA AGTCGATTGG GATCGCCCAG GTGCGGGAGC TGCAGCAGGC TCTCGTTTAC
CGGCCCTACG GTGCCCGGCA CCTGTGCCTG GTGCAGGAGG CCGAAGGCCT GACCGCGGAA
GCGGCCAATG CCCTTTTGAA GACCCTGGAG GAACCGCCGG GGCCGGTGCT GTTTATCCTG
ACCAGTGCCC GGCCCGAACG GCTGCCGCCC ACGGTGGTTT CCCGCTGCCT GAAGATCCCC
TTCCGGCCGC TGACCAGGGA TGAAATCACT TCCGGACTGG AGACAATGGG GTTTAAGGGG
GACATGGTGC CGCTGGCGGC CCGCCTGGCC GGGGGCAGCC TGGGACGGGC GGCGGAACTG
GCCGCCGGCG GGGACGGCCT GGACTGGCGG GAAAAGGCGG CGAACATGGC GGAGGAATTT
CTTTCCGGGA TCGGAACTGC CGAATTGTTT GCCCGGGCCC GGGAACTGGG GGAACGGGCT
GAAATGCTGG TCCGGACCGA GTACCTGCTC CTGTGGTACC GGGACCTCTT GCTGTGGCGG
GAGACCGGTT TCGAGGGATT GCTGATCAAT GCGGACCGCC TGGAACAGGT CCGGGTGCAG
GCGCGTCTGG CGGACGGCCC GGCTCTGGCA CGGAGCATCG CTACTATTGA GGATACGAGA
AAGAAACTGC TGGCCAACGT GAACGTACGC CTGGCGGCGG AGGGATTGTG CCTGCGCCTG
GCGGGGCTGG CCGAGGAGGA CGGATATGAC CGGGCAACTG GTTGGAGTAC AGTTTAA
 
Protein sequence
MLDGIIGQEL AKRYFQRAVE GGCLAHAYLF HGPAGVGKKS LARALAQALV CNTAENNSCG 
LCPACRMFLA GSHPDLRVLD GAEKSIGIAQ VRELQQALVY RPYGARHLCL VQEAEGLTAE
AANALLKTLE EPPGPVLFIL TSARPERLPP TVVSRCLKIP FRPLTRDEIT SGLETMGFKG
DMVPLAARLA GGSLGRAAEL AAGGDGLDWR EKAANMAEEF LSGIGTAELF ARARELGERA
EMLVRTEYLL LWYRDLLLWR ETGFEGLLIN ADRLEQVRVQ ARLADGPALA RSIATIEDTR
KKLLANVNVR LAAEGLCLRL AGLAEEDGYD RATGWSTV