| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_5067 |
|---|
| Symbol | |
|---|
| ID | 5902529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 5466084 |
|---|
| End bp | 5467187 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641565588 |
|---|
| Product | secretion protein HlyD family protein |
|---|
| Protein accession | YP_001686685 |
|---|
| Protein GI | 167649022 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.592232 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCG TGTCGAAGAA GAAACTTGTT CCCCTGATCG TCGGCGGCGT CGCCGTGGCG
GCGCTGGCTG TCGGCGGCGG CCTGTGGTTC ATCGACAAGC AACGCTACGA AACCACCGAC
AACGCCTTCG TCCAGGCCGA CACGGTCCAG GTCAGCCCGC AGGTTTCCGG CTATGTGGCC
GAGGTGCTGG TGGCCGACAA CCAACGGGTC GAGGCCGGTC AGGTCGTGGC CCGCATCGAT
CCCGCGCCCC TCCAGGCCAA GCTCGACCAG GCCGTCGCCA ACGCCCAGGC CCTCGAGGCC
GCCGTCCGGG GGGTCGATGA CAAGGCCGCG CTCGAACAGG CGATGATCGC CCAGCGCGCC
GCCGGCGTCG CCAGCGCCCA GGCCGACCAG GGCCGCGCCA AGGCCGATCT GCAACGTTAT
GACGCCCTGG CCCAGCAGGG CTGGGTCTCG ACCCAGAAGG TCCAGACCAC CCAAGCCGGC
GCCGCCCAGT CGGCCGCCGC CGTGCAGAGC GCCCAGGCGG CCCTTGAGGC CGAGCGCCGC
ACCGCGCAGT CGCTGGGCTC GGCCCGCGCC CAGACCGTGG CCCAGGCCGC CGCCGCCCGG
GCCGCCGTCG AACAGGCCCG CATCGACCTG GACCGCACGG TGATCCGCGC GCCCGCCGCC
GGCGTGGTCG GCGCCCGTTC GGTGCGCCCC GGCCAGCTGG TGCAGCCGGG CGTGGCCCTG
ATGTCGATCG TCCCTGTCGG CCAGGGCTAT ATCGTCGCCA ATTTCAAGGA GACCCAGGTC
TCGCGTCTGC GGGTCGGCCA GCCGGTCGAG ATCAAGGCCG ACGCCTTCGG CAAGAGCGTG
ATCCACGGCA AGCTGGACAG CTTCGCCCCG GCCACCGGCC AGGAGTTCGC CCTGATCCCG
GTCGAGAACG CCGTGGGTAA CTTCACCAAG ATCACCCAGC GCCTGCCGGT GAAGATCGTC
GTCGAGAAAT CGACCCTGGG CTCGGCCCTG CGTCCCGGCC TGTCGGTCGA CGTCAAGGTC
GATGTGCGCG ATCGCTCGGG CGCCTCCTTC GCCGAGGCCG GCCAGCCGAC CCCGCGCCTC
GCCCAGCAGG GCGTCTCGCG CTAG
|
|---|
| Protein sequence | MAAVSKKKLV PLIVGGVAVA ALAVGGGLWF IDKQRYETTD NAFVQADTVQ VSPQVSGYVA
EVLVADNQRV EAGQVVARID PAPLQAKLDQ AVANAQALEA AVRGVDDKAA LEQAMIAQRA
AGVASAQADQ GRAKADLQRY DALAQQGWVS TQKVQTTQAG AAQSAAAVQS AQAALEAERR
TAQSLGSARA QTVAQAAAAR AAVEQARIDL DRTVIRAPAA GVVGARSVRP GQLVQPGVAL
MSIVPVGQGY IVANFKETQV SRLRVGQPVE IKADAFGKSV IHGKLDSFAP ATGQEFALIP
VENAVGNFTK ITQRLPVKIV VEKSTLGSAL RPGLSVDVKV DVRDRSGASF AEAGQPTPRL
AQQGVSR
|
|---|
| |