| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_5016 |
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| Symbol | |
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| ID | 5902478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | + |
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| Start bp | 5419078 |
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| End bp | 5420118 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641565537 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001686634 |
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| Protein GI | 167648971 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.739471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCCC TCCCGAAACC CCTCGTCCAG CCTAAGCTCC TTTCCGTCCT GGATGGCACG
AGCGCCAAAC GCCCGCCGGT GTGGTTCATG CGCCAGGCTG GTCGCTACCT GCCGGAATAC
CGGGCGGTGC GGGCGACGGA ACCGACCTTC ATCGATTTCT GTCTGAATCC GGAGAAGGCC
GCCGAGGTCA CCCTGCAGCC GATGCGGCGG TTTCCCTACG ACGCGGCCAT CGTGTTCGCC
GATATCCTGC TGATCCCCCA GGCGTTGGGC CAAAAGGTGT GGTTCGAAGC CGGCGAGGGA
CCCAAGCTGG GCGAACTGCC GTCGATCGAG TCGATGCGCG AGCTGACGGG CCAGGCCGGC
CAGGCGCTGG GGGCGGTGGG CGAGACCCTG AGCCGCGTGC GTTCGGTCCT GGAACCGGAG
CGCGCCCTGA TCGGCTTCGC CGGCGCGCCG TGGACGGTGG CGACCTACAT GATCGAAGGC
GGATCCAGCG ACCGCTCCGG CGCGCGGACC TTTGCCTATC AGCAGTCCGA CAAGCTTGAC
GCCCTGATCC AGGTGCTGGT CGATGCGACG ATCGACTATC TGGCGATGCA GGCGGCGTCG
GGCGCCCAGG TGCTAAAGCT GTTCGAGAGC TGGGCCGAGG GCCTGTCTGA GCCGCTGTTC
GAGCGGCTGG TGACGAAACC GCATACGGCC ATCGTCGAGG GTCTGCGGGC GAAGGGTGTG
ACCACCCCGA TCATCGGCTT CCCGCGCGGG GCGGGGACGC TGGTCGAGGC CTATGCCAGA
ACCGCGCCGG TGCAGGGCGT GGCGCTGGAC ACCCAGGCCT CGGCGGCGCT GGGCCAGGCG
ATCCAGAAGA CCAAGGCCAT CCAGGGCGCG CTGGATCCGT TGCTGCTGCG GGCCGGCGGC
GACGCCCTGC TGACGCGGGT CGATCAGCTT CTGGAGCAAT GGGGTCACGG CCCCTACATC
TTCAACCTGG GTCACGGCAT CCTGCCTGAT ACGCCGATCG CCCATGTCGA ATCGGTGCTG
GCCCGGGTCA CCGGCAAGTG A
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| Protein sequence | MTSLPKPLVQ PKLLSVLDGT SAKRPPVWFM RQAGRYLPEY RAVRATEPTF IDFCLNPEKA
AEVTLQPMRR FPYDAAIVFA DILLIPQALG QKVWFEAGEG PKLGELPSIE SMRELTGQAG
QALGAVGETL SRVRSVLEPE RALIGFAGAP WTVATYMIEG GSSDRSGART FAYQQSDKLD
ALIQVLVDAT IDYLAMQAAS GAQVLKLFES WAEGLSEPLF ERLVTKPHTA IVEGLRAKGV
TTPIIGFPRG AGTLVEAYAR TAPVQGVALD TQASAALGQA IQKTKAIQGA LDPLLLRAGG
DALLTRVDQL LEQWGHGPYI FNLGHGILPD TPIAHVESVL ARVTGK
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