Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_4972 |
Symbol | |
ID | 5902434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 5376063 |
End bp | 5376923 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641565493 |
Product | integrase catalytic region |
Protein accession | YP_001686590 |
Protein GI | 167648927 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.422508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTTCG GGTTCGTCGA TGAGCACCGC GGCGTCTGGC CGGTTCGGAT GATGTGTCGG GTCCTGGGCC TGTCGGCCAG CGGCTACTAC GCCTGGCGCG TCAGGCCCGA GAGCCGGCGG GCGGCGGCCA ACCGCGCCCT GATCGAGGAC ATCCGCCTGA TCCATGCCGA GAGCTGCGGG ACCTATGGCT CGCCGCGCGT CCACGCCGTC TTGCGCGGCC ATGGTCGCCG TGTCGGACGC TCGCGGGTCG AGCGGCTGAT GCGCCGCGCC GGCCTGCGCG GGCTGGCCGC ATTACCCCGC CGCACCCGGA CGACCGACAG CCGCCATGGC TATCCGATCG CGCCCAACAG GCTCGCCCGT CACTTTCAGG CGGCGGCGCC TGGCCAGGTC TGGCTCGCCG ACCTGACCTA TATTCCGACC GGGGAAGGCT GGCTCTACCT GGCCGGCATC CTCGACATGC ACACCCGCAA GCTCGTCGGC TGGTCGATGC GCGACACCTT GCACGCCCAG ATCGCCTTGG ACGCCCTGAC CATAGCCATC GCGCGCCAAA AACCCGCGCC AGGCCTTATT CATCATTCGG ATCGCGGCAT CCAATACGCC GCCGAGACCT ATCGTTCGGC CCTGGCCCGG TCAGGGATCA CCCCGTCCAT GAGCCGCAAG GGCGATTGCT GGGACAACGC GCCCATGGAG AGCTTCTTCC ATACCCTCAA GACCGAGCGG GTCCATCATC GGATCTACGC CACCCGCGCC GAGGCCCGGC GCGATCTGTT CGGCTATATC GAGGGCTTCT ACAATTCACG CCGCCTGCAC TCGGCTCTGG GCTATATCAG CCCCGCCGAG GCCGAACGCA GAGCGGCTTA A
|
Protein sequence | MKFGFVDEHR GVWPVRMMCR VLGLSASGYY AWRVRPESRR AAANRALIED IRLIHAESCG TYGSPRVHAV LRGHGRRVGR SRVERLMRRA GLRGLAALPR RTRTTDSRHG YPIAPNRLAR HFQAAAPGQV WLADLTYIPT GEGWLYLAGI LDMHTRKLVG WSMRDTLHAQ IALDALTIAI ARQKPAPGLI HHSDRGIQYA AETYRSALAR SGITPSMSRK GDCWDNAPME SFFHTLKTER VHHRIYATRA EARRDLFGYI EGFYNSRRLH SALGYISPAE AERRAA
|
| |