Gene Caul_4794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4794 
Symbol 
ID5902256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5183807 
End bp5184739 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content63% 
IMG OID641565314 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001686412 
Protein GI167648749 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.865539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.851867 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGC GGATTTTCAT CACCGGCGCC GCGGGACTGG TGGGCCAGAA CCTGATCGCG 
TCGCTGTCCA AGGCCGCCGA TATCGAAGTG GTGGGCGGCG ACAAGAACCC GCGCAACCTG
AAGATTTTGC GGGACCTCAA TCCGAACGCC CGCCTGATCG AAGCCGACTT CGCCGAGCCG
GGCGCCTGGG AGCAGGAGGT GGCGGATTGC GACGCGGTCG TGATGCTGCA GGCCCAGATC
GGCGGCCTCT ATGAAGAGGA GTTCGTCCGC AACAACGTCA CGGCGACCAA GCGCGTCATG
GACGCCGCCT CGGCCGGCAA GCCCAGCTAT CTGGTCCACG TCAGTTCGTC GGTGGTCAAT
TCCGCCGCCC ACGACTTCTA CACCGAGACC AAGAAGACCC AGGAGGCCCT GGTCAACGAA
TATCCGATCA AGAAGGTCGT GCTGCGGCCG ACGCTGATGT TCGGCTGGTT CGACCGCAAG
CACGTGGGGT GGCTGAAGCG CTTTCTCGAC CGCGCTCCGG TCTTCCCCAT CCCCGGCAAT
GGGCGCTATC TGCGCCAACC GCTATTTGCT GGCGACTTCT CGGCGATCAT CGAATCCTGC
CTGCGCAGCG AGATCGAGGG CGCCTACAAC ATCAGCGGCC TCGAGCGCAT CGACTATGTC
GACATGATCA AGACGCTGCG GTCGGTGACC GGCGCGAAGA CGCCGATCGT GCACGTGCCC
TACAGCCTGT TCTGGGCGAT GCTGGCGACC TACGCCCTGT TCGACAAGAA CCCTCCGTTC
ACAACCAGTC AGTTAAAAGC CCTGGCGACG CCGGACGTCT TCGAGGTGAT CGATTGGCCG
GGGACGTTCG GAGTGCCGGC CACGCCGCTG CGCACCGCCT TCGAGCGGAC CTTCCTCGAT
CCGAAATATT CCGACGTAAC GCTCGAGTTC TAG
 
Protein sequence
MTKRIFITGA AGLVGQNLIA SLSKAADIEV VGGDKNPRNL KILRDLNPNA RLIEADFAEP 
GAWEQEVADC DAVVMLQAQI GGLYEEEFVR NNVTATKRVM DAASAGKPSY LVHVSSSVVN
SAAHDFYTET KKTQEALVNE YPIKKVVLRP TLMFGWFDRK HVGWLKRFLD RAPVFPIPGN
GRYLRQPLFA GDFSAIIESC LRSEIEGAYN ISGLERIDYV DMIKTLRSVT GAKTPIVHVP
YSLFWAMLAT YALFDKNPPF TTSQLKALAT PDVFEVIDWP GTFGVPATPL RTAFERTFLD
PKYSDVTLEF