Gene Caul_4657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4657 
Symbol 
ID5902119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5033769 
End bp5034458 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content68% 
IMG OID641565176 
ProductHly-III family protein 
Protein accessionYP_001686275 
Protein GI167648612 
COG category[R] General function prediction only 
COG ID[COG1272] Predicted membrane protein, hemolysin III homolog 
TIGRFAM ID[TIGR01065] channel protein, hemolysin III family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.883194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGA CGACCAGCAT CCTTCCGGCA GACCTTCCGC CGACGCACTA TCCCACGCCC 
GCCGCCAAGT GCGCCGATCT GGTGGTGCAT CTGGCCGGCC TGGCCTGCGC CCTGCTGGGC
GGCGGGATCC TGCTGGGCCT GGCCTTTGGC CTGGGATCGC TGAGCCAAGT GGCGGCGATC
AGCGTCTACA CCGTCGGCCT GATCACCATG CTGTCGTTGT CGACCGCCTA CAACTTCGCC
AAGGCGCGCT GGCGACCGCT GCTGCGCCGC TTCGACCACG CCGGCATCTT CATCATGATC
GCCGCCTCCT ACACCCCGTT CACCACCCAG AACCTGCACG GCTGGTGGGC GATCGGCATG
ACCACGGCCG TCTGGTCGGT GGCCGGCGTC GGCGTCGCCG CCAAGCTGTT CCTGCCGGGC
CTGGACAAGC GCTTCTGGGT TGGCCTCTAC CTGGCCCTGG GCTGGCTGGT CCTGGTGGCC
ATCAAGCCGA TGATCGACGG CATGGGCTGG GTGGCCCTGC TGCTGCTGGC GATCGGCGGC
GTGATCTATT CGACCGGTAC GGTGTTCTAC CTGATGAAGC GGCTCAAGTT CCGGCGGGCG
ATCTGGCACG GTCACGTGAT CGGGGGCGCC GGCCTGCACT ACGCCGCCGT TCTGGTCGGG
GTGGTCCTGG CTTCGAGCGG ACACCCCTGA
 
Protein sequence
MTQTTSILPA DLPPTHYPTP AAKCADLVVH LAGLACALLG GGILLGLAFG LGSLSQVAAI 
SVYTVGLITM LSLSTAYNFA KARWRPLLRR FDHAGIFIMI AASYTPFTTQ NLHGWWAIGM
TTAVWSVAGV GVAAKLFLPG LDKRFWVGLY LALGWLVLVA IKPMIDGMGW VALLLLAIGG
VIYSTGTVFY LMKRLKFRRA IWHGHVIGGA GLHYAAVLVG VVLASSGHP