Gene Caul_4414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4414 
Symbol 
ID5901875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4784230 
End bp4785195 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content72% 
IMG OID641564932 
Product2-nitropropane dioxygenase NPD 
Protein accessionYP_001686032 
Protein GI167648369 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTAA AGACTCCACT CTGCGCGATG CTGGGCATCG AGCACCCGAT CCTGCTGGCC 
GGGATGGGCG GGGTGTCCTA CGCCCCGCTG GCGGCGGCGG TCTCCAACGC CGGCGGCTAC
GGCGTGCTGG GCATGGCCGG GACCACCCCC GCCTTTATCC GCGAGCAGAT GGCTCAAGTC
CGGTCGCTGA CCGACAAGCC GTTCGGCGTC GATCTGCTGG CGGCCACGCC CGACGCCCTG
ACGGCGGCGG TCGAGGTGAT CATCGAGGGC GGCGCCTCGT CGTTCATCGC CGGCCTGGGC
GTGCCGCTGC CGATCATCGC GCGGCTGAAG GCGGCGGGGC TGAAGGTCAT GGTGGTCTGC
GGGGCGGTCA AGCACGCGGT GAAGGCCCAG GAGGCCGGCT GCGACGCGGT GATCTGCCAG
GGCGGCGAGG GCGGGGGCCA CACCGGCCTG GTCGGGACCC TGCCGCTGGT GGCCCAGGCG
GTGGACGCCG TCGACATTCC CGTGGTGGCG GCCGGCGGGC TGTATGACGG CCGAGGCCTG
GCGGCGGCCC TGGCCCTGGG CGCCCAGGGC GTCTGGATGG GCACGCGGTT CATCGCCTCG
ACCGAAGCCC ACGCCGGCGA CCTCTATCGC CAGGCGGTGC TGGAGGCGGC CGACGAGGAC
ACCATCCGCA CCCGGTCCTA TTCAGGCAAG CCGATGCGGG TGCGCAAGAA CGCCTGGGTC
GACGACTGGG AGGCTCGTCC GGCCGATATC CAGCCCTTCC CGCAACAGGC GATGGTCAGC
ATCCAGGCCG GGGCGCTGGG CGGCATCGGC GGACAGATCG AGGGGCTGGA CCCTGACCGT
TCGTGCTTCG CCATGGGCCA GAGCGCCGGG GGGATCCACG AGGTGCTGCC GGCGGGGGAA
ATCGTGGCGC GGATCATGGC CGAGGCCGAA GAGGCGATCG GACGAGTGGC GGGGTTAAGG
GGGTAG
 
Protein sequence
MTLKTPLCAM LGIEHPILLA GMGGVSYAPL AAAVSNAGGY GVLGMAGTTP AFIREQMAQV 
RSLTDKPFGV DLLAATPDAL TAAVEVIIEG GASSFIAGLG VPLPIIARLK AAGLKVMVVC
GAVKHAVKAQ EAGCDAVICQ GGEGGGHTGL VGTLPLVAQA VDAVDIPVVA AGGLYDGRGL
AAALALGAQG VWMGTRFIAS TEAHAGDLYR QAVLEAADED TIRTRSYSGK PMRVRKNAWV
DDWEARPADI QPFPQQAMVS IQAGALGGIG GQIEGLDPDR SCFAMGQSAG GIHEVLPAGE
IVARIMAEAE EAIGRVAGLR G