Gene Caul_4356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4356 
Symbol 
ID5901817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4732799 
End bp4734610 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content72% 
IMG OID641564874 
Productferuloyl-CoA synthase 
Protein accessionYP_001685974 
Protein GI167648311 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.724416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGGA CATCAGAGAC CCACGCGCCG TTTCGAGACG CTCGCTACGC GCCCCGGGCG 
CTGGAGGTCG AGCGGCGCGG CGACGTCCTG ATCCTCAAGA ACCCCACGCC CTATTCCAGC
ACCGTCCAGA CCGTGACCGC GCCCCTGGCC CGTTGGGCGG GGCAGGCGCC GAACCGCATC
TGGCTGGCGG AGCGCGACGG CGAGGGCTGG CGGACAGTGA CCTATGCCGA AGCGGTCCAT
CAAGTCGCGC ATCTGGCCGG CGGTCTGTCC CGCCTGGGCC TGTCGCGCGG CAAGCCGCTG
CTGATCCTGT CCCGCAACGG CGTCGACAAC GCCCTGATCG GCTACGCGGC CATGAGCCTG
GGCGCGCCGA TCGCCCCGGT TTCGCCGCAG TACGGCCTGA GGGGCGCCGA CCTTTCGCGG
CTGGCCTTCG CCGTCGAGCG GCTGAAGCCC GCAGCCGTCT ATGTCGATGA CGCGGAGGCG
TTCGGCGACG CCCTGGCCGC GCCGTTCCTG GCCGGTTTGC CGGTGGTGGC CAGCCGCAAC
GCCCGCGAGG ACGACATAGG GTTCGAGGCC CTGCAGGACG GCCCGCCGCT GTCGCCCGTC
TGCCGTCCCG ACGACATCGC CAAGCTGTTG CTGACCTCCG GCTCGACGGG CCAGCCCAAG
GCGGTGATCT GCACCCACGC CAACATCGCC CTCAACGCCG CCCAGATCGC CGCCTGCTAT
CACGATCCCG ACCCGCCGGT GCTGGTCAAC GCCGCCCCCT GGAGCCACAG CCTGGGCGCC
AACGCCATCC TGCACATGGT GCTACACCGG GGCGGGACCC TGTACATCGA CGCCGGCCAG
CCCGTGGTCG GGCGCTTCGA CGAGACCGTG CGAAACCTGC GCGAGGTGGC GACCACCTAT
CACAACATGG TCCCGGCCGG CTGGGGGCTG CTGGTCGGCG AACTGGAGCG CGACGAGGCC
CTGGCGGCGA AATTCTTCGA GAAGGTGCGG GTGCTGCAAT ATGGCGGGGC GTCGATGGCG
CAGTCGATCC TCGACCGCGT CCAGGCCGTG GCCGTGCGCA CGATCGGCCG GCGGGTGACC
TTCGCGGCCG GCTATGGGGC CACCGAGACC GGCCCGACCG CCTGCAACAT CCACTGGCTC
AACGCCCGGT CCGGCATGAT CGGCCTGCCC ACCCCCGGCA CGGCGGTGAA GCTGGTCCCG
GCGGCCAGCG GCCAGGAAGG CTTGGGGGGC GCCAAGTTCG AGATCCGGGT CAAGGGACCG
CAGGTCTCGC CGGGCTATCT GGACATGCCC GAGGCTTCCG CCGAGGCCTT CGACGAGGAC
GGCTTCTACC GGCTGGGCGA CGCCGCGCGG CTGGCCGATC CGCTGGACCC CGCCGCGGGC
CTGGTGTTCG ACGGCCGGCT GGTCGAGAAC TTCAAGCTGG CCAGCGGGAC CTTCGTGGCG
GCCGGGGCGC TGCGGGTGGC GGCGGTGTCG GCGATCGCCG GCGCGGTGGC GGACGCGGTG
GTCTGTGGCG AGGGGCGCGA GGGCGTCGGC CTGATGCTGT TCCTCGACCC CAAGGCCTGC
CTGCGCATCG GCGACCCCGA GGCGGTGCGG GCGGCGATCC GCTCGGGCCT GGAGCGCCTG
AACGGCATCG CCCGGAGCGG CGGCGCCAAG GTCGCCCGCG CCCTGATCCT CGACGGCGGC
CCGGACGCGG CCAGCGGCGA ACTGACCGAC AAGGGCTATA TCAACCAGGC CCTGGCGCGG
GACCGTCGGC CGGCCGAGCT GGCGCGGCTT TTCGCCGATG AGCCGGACGA CGGGGTGATG
ATGTTCCCTT AA
 
Protein sequence
MDGTSETHAP FRDARYAPRA LEVERRGDVL ILKNPTPYSS TVQTVTAPLA RWAGQAPNRI 
WLAERDGEGW RTVTYAEAVH QVAHLAGGLS RLGLSRGKPL LILSRNGVDN ALIGYAAMSL
GAPIAPVSPQ YGLRGADLSR LAFAVERLKP AAVYVDDAEA FGDALAAPFL AGLPVVASRN
AREDDIGFEA LQDGPPLSPV CRPDDIAKLL LTSGSTGQPK AVICTHANIA LNAAQIAACY
HDPDPPVLVN AAPWSHSLGA NAILHMVLHR GGTLYIDAGQ PVVGRFDETV RNLREVATTY
HNMVPAGWGL LVGELERDEA LAAKFFEKVR VLQYGGASMA QSILDRVQAV AVRTIGRRVT
FAAGYGATET GPTACNIHWL NARSGMIGLP TPGTAVKLVP AASGQEGLGG AKFEIRVKGP
QVSPGYLDMP EASAEAFDED GFYRLGDAAR LADPLDPAAG LVFDGRLVEN FKLASGTFVA
AGALRVAAVS AIAGAVADAV VCGEGREGVG LMLFLDPKAC LRIGDPEAVR AAIRSGLERL
NGIARSGGAK VARALILDGG PDAASGELTD KGYINQALAR DRRPAELARL FADEPDDGVM
MFP