Gene Caul_4200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4200 
Symbol 
ID5901662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4563549 
End bp4564316 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content75% 
IMG OID641564722 
Productaminotransferase class IV 
Protein accessionYP_001685822 
Protein GI167648159 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR03461] aminodeoxychorismate lyase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.108763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCC CTCTGGACGA TCGCGGCCTG CTGCTGGGAG ACGGCCTGTT CGAGACGATG 
CTGTGGGTCG ATGGCGGCCT GCCGCGTCTG GACGCTCACC TGGCCCGGAT GGCGGCCGGC
TGCGAGACCC TGGGCCTGCC GCTGTTCGAC ATCAGCGAGG CCCGCGCGCT GTGCTGGGCG
GCGCCGGCCG AGGCCGGGGT GGACGGAATC CGGGCCGCCG TGCGCCTGAC CCTGACGGCG
GGCTCCGGCG GCCGGGGCCT GGACCGTCCC GCCGCGCCCG CGCCGCGCCT AGCGGCCACG
GCCGCCGCCG CGCCGGTCGT CACGACGCCC GCTGACCTGG CGCTGGCCAA GACCCGCCGC
AACGAAGGCT CGCCGGCCGC GCGGCTGAAG ACCCTGTCCT ATGTCGACAA CGTCCTGGCC
CGGGCCGAGG CGCGGGCGGC GGGCGCGGAC GAGGCTGTGA TGCGCAACAA TCACGGCGAC
CTGGCCTGCG CGGGGGCCGC CAACCTGTTC TGGATCGCCG GGGGGCGGTT GTTCACGCCC
GCCCTGCATT GCGGCGTGCT GAGCGGCCTG ACCCGGGCGC GCGTGCTGGA CCTGGCCCGC
CAGCTGGACG TCGAGGTTCA CGAGGTCGCG ACGGGCGCGG AGGCCCTGGA CGAGGCCGAG
GCGGTGTTTC TGACCAACAG CCTGATCGGC GTGCGGCCGG TTCGGCGGTT CGAGGGCGAG
ACCTTCGGTC CGCACCCGCT CGTCGAGCGT CTGCGCGCCG CAGTCTAG
 
Protein sequence
MSFPLDDRGL LLGDGLFETM LWVDGGLPRL DAHLARMAAG CETLGLPLFD ISEARALCWA 
APAEAGVDGI RAAVRLTLTA GSGGRGLDRP AAPAPRLAAT AAAAPVVTTP ADLALAKTRR
NEGSPAARLK TLSYVDNVLA RAEARAAGAD EAVMRNNHGD LACAGAANLF WIAGGRLFTP
ALHCGVLSGL TRARVLDLAR QLDVEVHEVA TGAEALDEAE AVFLTNSLIG VRPVRRFEGE
TFGPHPLVER LRAAV