Gene Caul_3995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3995 
Symbol 
ID5901457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4324861 
End bp4325919 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content71% 
IMG OID641564516 
ProductLacI family transcription regulator 
Protein accessionYP_001685618 
Protein GI167647955 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.917064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAC GGAACGAACG TCAGCGGCGC CGCACGACCC AGAGCGCGAC CATTCGCGAC 
GTGGCCGCCC TGGCTGGCGT GTCGCCGATG ACCGTGTCGC GGGTGATCAA CCGCGAGACG
ACGGTCAAGT CGGAGACCAA GGCCCTGGTC GACGCGGCGA TCCGCGACCT CAACTACGCG
CCCAACCCCG CCGCCCGCAG CCTGGCCGGC TCGGCCCCGT TCCGCATCGG CCTGCTCTAC
GACAACCCCT CGACCGGCTA TCTGTCGGAA TTCCTGGTCG GGGCGCTGGA CGAGAGCAGC
CGGACGGGCG CGCAAGTGGT GATCGAGAAG TGCGCCGAGC CCGAACTGGC CGGCGCCACC
CTGACGCGGC TGCTGAAGAC CGGCGTCGAC GGCCTGATCC TGCCCGCCCC GCTCTGCGAG
TCCGCCCAGG TCCTGGCCGA GGTCAAGGCG GCCGGCGCCG CCGCGGTGGC CGTGGCGCCC
GGCATGCCCA GCGCCGACAT GGCCACCATC CGCATCGACA ACGAGGCCGC CGCCTTCGAA
CTGGCCCAGC ACCTGCTGGC CCTGGGCCAT AAGCGGTTCG GGATCATCAA GGGCCACCCC
AACCAGACGG TCAGCCAGCA GCGCCTGGAC GGCTTCATGT CGGCCCTGAA GGCGGCCGGG
ATCCCGGACA AGGCCGTGCG CATCGAGCAG GGCTATTTCA CCTATCGCTC GGGCCTGGAG
GCGGCCGAGC GGCTGCTGGG CGCCGACGAC CGGCCCACCG CCATCTTCGC CGGCAATGAC
GACATGGCCG CGGCCACCGC CGGGGTCGCC CACCGGATGG GCCTGGACGT GCCGGAAGAC
GTGTCGATCG TCGGCTTCGA CGACACCTCG ATCGCCGCCA ATATCTGGCC GGCCCTGACC
ACGGTCCACC AGCCGATCGC CGCCATGGCC CGCGCCGCCG TCGATCTGGT GCTGGAGGAG
ATCCGCCGCA AACGCGGCAA GGCGGGCGAG CCGCGCCAGC TGATGCATCC GCATACGCTG
ATCGTGCGGG ATTCGACCGG GCCGGCGCCG GAAGGGTGA
 
Protein sequence
MSERNERQRR RTTQSATIRD VAALAGVSPM TVSRVINRET TVKSETKALV DAAIRDLNYA 
PNPAARSLAG SAPFRIGLLY DNPSTGYLSE FLVGALDESS RTGAQVVIEK CAEPELAGAT
LTRLLKTGVD GLILPAPLCE SAQVLAEVKA AGAAAVAVAP GMPSADMATI RIDNEAAAFE
LAQHLLALGH KRFGIIKGHP NQTVSQQRLD GFMSALKAAG IPDKAVRIEQ GYFTYRSGLE
AAERLLGADD RPTAIFAGND DMAAATAGVA HRMGLDVPED VSIVGFDDTS IAANIWPALT
TVHQPIAAMA RAAVDLVLEE IRRKRGKAGE PRQLMHPHTL IVRDSTGPAP EG