Gene Caul_3959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3959 
Symbol 
ID5901421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4288328 
End bp4289107 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content69% 
IMG OID641564480 
Productpeptidase M50 
Protein accessionYP_001685582 
Protein GI167647919 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.227967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.395043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGA CCGACATCCA ACCCACCAAG CCCGCTCCCA TCAGCGCCAA CGCCTTGATC 
CTGGTGGCGG TGTTCGCGGC CCTGGCCTTC GCCCTGGCCC GGACGGCGCA GCCCCCTGGC
GTGCTGACCT TCGCCTTCGT GGTGGTGGGC TGGATCCTCA GCGTGGTGGT CCATGAGTTC
GCCCACGCCT TCGTCGCCTA CAAGGCCGGC GACCACACGA TCGCCGAGAA GGGCTACCTG
ACCCTCGACC CGCTGAAATA CACCGACCTG TCGACCAGCC TGGTGCTGCC GCTGATCGTG
CTGGCCATGG GCGGCATCGG CTTCCCGGGC GGGGCGGTCT ATCTGCGCGA GGACCTGATG
CGCAGCAAGC GCGGCCGGGC CCTGGCCTCG CTGGCCGGGC CGCTGGGCAC GCTGGCGGTG
CTGGTCGGCC TGGCCGTCTG CCTGGCGACC GACCGGGCGT TCGGCGTCGC CAGCAGCCCG
CTGTCGCGCG CCGCCGCCTT CCTGGCTTTC CTGCAGGCCT GGGCCCTGGT GCTGAACCTG
CTGCCCCTGC CCGGCCTGGA CGGCTTCGGC GTGATCCGCC CCTACCTGCC GCCGGCGATC
CAGCAGCGGG CGCTGAAGTT CGGCAACCTG GTGTTCATCG GCCTGTTCCT GGCGATCTTC
TTCGTCCAGC CGGTGGCCAA CGCGCTGTTT TCCTTGGTTT TCCTGATCAG CGACCTGTTC
GGCGTGCCGC GCCCCGACAT CAGCGCGGGA TACCAGGCGT TCCGGTTCTG GGTGTCCTAA
 
Protein sequence
MTLTDIQPTK PAPISANALI LVAVFAALAF ALARTAQPPG VLTFAFVVVG WILSVVVHEF 
AHAFVAYKAG DHTIAEKGYL TLDPLKYTDL STSLVLPLIV LAMGGIGFPG GAVYLREDLM
RSKRGRALAS LAGPLGTLAV LVGLAVCLAT DRAFGVASSP LSRAAAFLAF LQAWALVLNL
LPLPGLDGFG VIRPYLPPAI QQRALKFGNL VFIGLFLAIF FVQPVANALF SLVFLISDLF
GVPRPDISAG YQAFRFWVS