Gene Caul_3547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3547 
Symbol 
ID5901002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3825857 
End bp3826573 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content70% 
IMG OID641564054 
Productphosphoglycolate phosphatase 
Protein accessionYP_001685172 
Protein GI167647509 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGCTC CGAATGAGAT CCTGAACGGC GCCGTCATCG CCTTCGACCT GGACGGCACC 
CTGGTCGACA CCGCCCCCGA CCTCGTGGTC TCGCTGAACA TCATCCTCGC CGAGGAGGGC
CTGCCGCCCC TGCCGTTCGA CGACGTGCGC AAGATGGTCG GCCGGGGCGC CAAGGCCTTG
CTGGAACGCG GCTTCGCCGC GGCCGGCGCG CCGCTCGACG CCGATCAGGC CCCAACCCTG
GTCGAGCGGT TCATCGCCCT CTATCTGGGC CGCATCGCCC ACGAGAGCGC CCCCTTTCCT
GGCGTGGTCG ACACCCTGAT CGCCCTGCGC GCCAGCGGCG CCAAGCTGGC GGTCTGCACC
AACAAGCTGA CCCACCTGTC GGTCGCCCTG CTCGACGCCC TGGACCTGAC GCAACATTTC
GACGCCGTGG TCGGGGCCGA CAGCGCCCCC GCCGCCAAGC CCGATCCGCG CCACGTGCTG
GCCGCGATCA CGGCGGTCGG CGGCGATCCG GCCCGCGCCG TGATGATCGG CGACAGCATC
AATGACGCCC TGGCCGCCAG GGCCGCCAAC GTCCCGACCG TGCTGGTGAC GTTCGGCTAC
ACCGAAGCCC CGGTCGAGAC CCTGGGCGGA GATCTGTTGA TAGACGCCTT CTCCGACGTG
CCATCGGCCT GCATCACGCT TTTGACCTCT TGCGGTCCCG GAACGACCGG GCTATAG
 
Protein sequence
MHAPNEILNG AVIAFDLDGT LVDTAPDLVV SLNIILAEEG LPPLPFDDVR KMVGRGAKAL 
LERGFAAAGA PLDADQAPTL VERFIALYLG RIAHESAPFP GVVDTLIALR ASGAKLAVCT
NKLTHLSVAL LDALDLTQHF DAVVGADSAP AAKPDPRHVL AAITAVGGDP ARAVMIGDSI
NDALAARAAN VPTVLVTFGY TEAPVETLGG DLLIDAFSDV PSACITLLTS CGPGTTGL