Gene Caul_3510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3510 
Symbol 
ID5900965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3788584 
End bp3789726 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content67% 
IMG OID641564016 
Productbeta-lactamase 
Protein accessionYP_001685135 
Protein GI167647472 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.189437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCCGGA AATTCGCTTC GATCGCCTTC ATCGTCGCGA CCCTCGTCGC CTGGCCCGCC 
CTCGCCGGCG ACCACAGGAC CCTCGACGCC GAGGCCGCCC GGCTGATGGC CCAGGGCAAG
ATCTCCGGCC TGGCCTTCGC GGTGATCGAG CACGGCAAGG TCGTTCACGT CAGCGCCCAG
GGCTGGCGCA ATGTCGACAA GAAGCTGCCC CTGACGCCCG ACACCATCCT GTACGGGGCC
TCGATCACCA AGGCGGCCTT CGGCCAATAC GTGATGATGC TGGTCGACGA CGGCAAGCTG
GACCTGGACA CCCCGATCAA GGCCTACCTG CCCAAACCCC TGCCCGACTA CGACGCCTAC
AAGGACCTGG CCGCGGACCC GCGCTGGGAG GCGATCACCC CGCGCATGCT GCTGACCCAC
ACCGCCGGCT TTCCCAACTT CCGCTGGCTG AACCCCGACG GGAAGCTGGA CATCAAGGCC
GCGCCGGGCT CGCGCTATCT CTATTCCGGC GAGGGTATCA ACCTGATGCA ATTCGTCATC
GAACAGGGGC TGGGCCTGAA GGTCGGCGAC GAGATGAATC GGCGGATTTT CCAGCCCCTG
GGCATGACCC GCAGCAGCCT GATCTGGCGC GACGACTTCG CCGCCAATCT GGCCGATGGT
TATCACGCCG ACGGCAAGTT CGAGGCGCAC GATGCGCGCG GCACGGTGAA GGCGGCCGGC
TCGCTGGACA CGACGGTCAC CGATCTGTCC AAACTGGCCG CGGCCATGGT CTCGGGCCGG
GGGCTATCGG CCAAGTCCGC CGCCGAACGG ATCAAGCCCA GTTTCCCGAT CGCCAACGCC
CACGAGTTCC CGCCGTCCCT GACCGACGAC GACCCGGCCA ACGCCAGGAT CGGCCTGGCC
GCCGGCATCG GCGTGGTGGT GTTCGACGGT CCCCAGGGCC ACGCCTTTTT CAAGGGCGGC
CACAACGACA TCACCGACAA CATGCTGATC TGCGTCGAGC GCGGCCAGCG CTGCATCCTG
ATGCTGACCA ATAGCGGCGT CGGCGCGAGA ATCTTCCCGC CGCTGCTGAA GGCGGCGCTG
GGCGACATCG GCATGCCGTG GACGTGGGAG TATAACCCTG TGCTGCCGGT GGAAGCGCCT
TAG
 
Protein sequence
MFRKFASIAF IVATLVAWPA LAGDHRTLDA EAARLMAQGK ISGLAFAVIE HGKVVHVSAQ 
GWRNVDKKLP LTPDTILYGA SITKAAFGQY VMMLVDDGKL DLDTPIKAYL PKPLPDYDAY
KDLAADPRWE AITPRMLLTH TAGFPNFRWL NPDGKLDIKA APGSRYLYSG EGINLMQFVI
EQGLGLKVGD EMNRRIFQPL GMTRSSLIWR DDFAANLADG YHADGKFEAH DARGTVKAAG
SLDTTVTDLS KLAAAMVSGR GLSAKSAAER IKPSFPIANA HEFPPSLTDD DPANARIGLA
AGIGVVVFDG PQGHAFFKGG HNDITDNMLI CVERGQRCIL MLTNSGVGAR IFPPLLKAAL
GDIGMPWTWE YNPVLPVEAP