| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3423 |
|---|
| Symbol | |
|---|
| ID | 5900878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 3699668 |
|---|
| End bp | 3701176 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641563929 |
|---|
| Product | Sel1 domain-containing protein |
|---|
| Protein accession | YP_001685048 |
|---|
| Protein GI | 167647385 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.346292 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGAGA CCAGCAATGC TGTTTCTCAC CTCGCCGTTC TCAAGCGGGG CTTGGCCAAC
ATGGTCGACA ACCGCGCGTC GCTGCTCCGC CGCCTGCCGG TTGGGGCGCT GGTCGCGGCG
GTGGTGATTC CGCTGGTCGG CTGCGACACC GGTCCCAGTT TCTGGTTCCA CAAGCGCGCC
AGCGCCTGCC CTCGTCCTCA GGCGGCGCAA GGGGTTTCCG GCCAGTTCAA TCAGCAGCAG
CAGGAAATCC GCTCGCTTCG CCAGGGCGGC TTCCGTGGCG ACTTCTTCGC CCAGCTCGAG
CTGGCCCGCC GCTACGAGGG CCAGCGGGCG GTCGACAAGA ACCTCGAGGA TCCGGTCGAG
GCGGCGGTCT GGTACGCCAT GGCCCTGTCC AACGCTGGCG GCTATTCGCC GATCGCCGCC
TATGAGCGGC GGGGCGGCCG GGATGAAGGC CCGCTGTCGC GATTCGACGA CTGCCGGGCC
TTCGAGCGTC ACGCCGCCTA CGGGGCGCTC GACCGCTTGC TGTCGCGAAT GTCGACCGAG
GAGCGCGAGA AGGTCCGCAA CCGCGTGATC TACATCCTTT CCACCCAGGG CGCCGACGGC
TACCGGGTGC TGGCGCGCAT GCACGACGGC TTCTTCGGCC CGTTCGGCGA GCCCTCCGAC
AACCTGCAGG CCATCGAGGC CTACGGCACG CCCAAGCGCA CCGGCGCCCC CGCGGCCCTG
GATCTGTTCC GCCGCAACGA CGTCGACGCC TATCTCTATA ACTATCTGGC GGTGCAGACC
GGCGACGTGT CGGCCTACGT GATGCTCAAG GACTTCGAGC GCTCCTCGCC GCAGCGGGCC
TCGTATGGCG GCTTCGTCGA GACCAAGGCC AAGCGCTGGA TCCCGCCCTA CGAGTTCTAC
CCGCCGGAAT CGCCCGACTC CGGCGTGCCG CATTCCGACG AGAGCGATCC GTCGGGCGAC
AGCAAGGAGG CGGCCCTGGC GCGCCTCAAC GAGCTGCCCT TCGTGCATAT CGGCGAGGCC
CTGGCCTATC TGCGGGTGAT CCCAGCGCCG GTGCTGGACG AGCGGATGCT CAGCGTCAAT
GAGGCCCAGA CCTTCCAGGC GATGGTCGGC CGGCCCATCA CTGGCCGCCT CTCGGGCATC
GAGAAGGTGC GGGCGATCCA GTACGCGGCG GTCAACGGCT CGTCCAAGGC CCAGCTGGTG
CTGGCGGTGA TGTATTCCGA AGGCGTCGGC GTGCCGCGCG ACTACGCCCG GGCCTATCAC
TGGTACGAGG AGGCCGAGCG GCAGGGATCG GCCGAGGCCA AGTACGCCAT GTCGACCTTC
TTCTCGCTGG GCCTGCAGGG CGTGGCCGAC CAGGATCGGG CCAAGGCCGT GGTCTACCAG
CTGGACGGCG CCCTGGCCGG CTTCAAGCCG TCGGTCTGGC GGCTGCAACA GCTGCTGTCG
CAGGTCTCGC GGCCGCCGCG CGCCGTCGCC GAGCGACCCC AGCCCTATGC CGAAAGGGAC
TATCGATGA
|
|---|
| Protein sequence | MHETSNAVSH LAVLKRGLAN MVDNRASLLR RLPVGALVAA VVIPLVGCDT GPSFWFHKRA
SACPRPQAAQ GVSGQFNQQQ QEIRSLRQGG FRGDFFAQLE LARRYEGQRA VDKNLEDPVE
AAVWYAMALS NAGGYSPIAA YERRGGRDEG PLSRFDDCRA FERHAAYGAL DRLLSRMSTE
EREKVRNRVI YILSTQGADG YRVLARMHDG FFGPFGEPSD NLQAIEAYGT PKRTGAPAAL
DLFRRNDVDA YLYNYLAVQT GDVSAYVMLK DFERSSPQRA SYGGFVETKA KRWIPPYEFY
PPESPDSGVP HSDESDPSGD SKEAALARLN ELPFVHIGEA LAYLRVIPAP VLDERMLSVN
EAQTFQAMVG RPITGRLSGI EKVRAIQYAA VNGSSKAQLV LAVMYSEGVG VPRDYARAYH
WYEEAERQGS AEAKYAMSTF FSLGLQGVAD QDRAKAVVYQ LDGALAGFKP SVWRLQQLLS
QVSRPPRAVA ERPQPYAERD YR
|
|---|
| |