Gene Caul_3401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3401 
Symbol 
ID5900856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand+ 
Start bp3673685 
End bp3674308 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content73% 
IMG OID641563907 
ProductLysR family transcriptional regulator 
Protein accessionYP_001685026 
Protein GI167647363 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.674925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0662611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGACG TGCTGTTCCC GATGGTGGTG CTGACCCACG CCATCGGAGA CTTCCAGGCC 
CACTTCCCCG ACACCGCCTT GCGCATTCAC GTCGAGGCCC TGGGCGCGGT GCTGCAGCCC 
GTGCTGGACG GCCGCTGCGC ATTCGGAGTG ACGGGCTCGC TGCCGGACGC GCCGCCGGAA 
CTGGTGCGCG AGCGGCTGAT CTCGCTGCGC ATGGTGCAGG TCGCCGCCGC CGGCCATCCC 
CTGACCGTCC TGCCCGGCCC ACTATCACCC GAGGACGTGG CCGGCCACGT CCAACTGGTG 
TTGACCGACC GCTCGCCCCT GAGCCAGGGC CGCGAGTTCG GGGTGTTCTC GGCCCGCACC 
TGGCGCCTGG CCGACCTGGG GGCCAAGCAC GCCTTCCTGC GCGCTGGCCT GGGCTGGGGC 
GGCATGCCCT GGGACCGGGT CGAGGCCGAT CTCGCGGCCG GGACCCTGGT CGAGCTGACG 
ATGCGCGACG CCCCCGCCGG CGGCTACAGG ATGCCGATGT ACGCCGCCCA CCGCGACGAC 
ACCCCGCCCG GCCCGGCCGG GCGCTGGCTG ATCGAGCGAC TGAAGGACAC GACGGCGCGG 
TGTCCGGGCC AGGAGGCGGC TTAA
 
Protein sequence
MVDVLFPMVV LTHAIGDFQA HFPDTALRIH VEALGAVLQP VLDGRCAFGV TGSLPDAPPE 
LVRERLISLR MVQVAAAGHP LTVLPGPLSP EDVAGHVQLV LTDRSPLSQG REFGVFSART 
WRLADLGAKH AFLRAGLGWG GMPWDRVEAD LAAGTLVELT MRDAPAGGYR MPMYAAHRDD 
TPPGPAGRWL IERLKDTTAR CPGQEAA