Gene Caul_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3400 
Symbol 
ID5900855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3672465 
End bp3673538 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content64% 
IMG OID641563906 
Producthypothetical protein 
Protein accessionYP_001685025 
Protein GI167647362 
COG category[S] Function unknown 
COG ID[COG4269] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.575257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.120686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGCG CCGCTACGGT CGCTCACGGC GAAACGCTGA CGTTCAGCCA GAAGATCAAG 
TCAGGCGACT TCGTCGGCCT GAGCTTCAAG AACTTCCTGC TGAACATGGT CACCCTGTCG
CTCTACCGCT TCTGGGCCAA GACCGAGGTG CGTCGCCGCA TCTGGGACAA GGTCAGCCTG
AACGGCGAGC CCTTCGAATA TACGGGCACG GGCAAGGAGC TGTTCTTCGG CTTCCTGAAG
GCCATGGTGG TGATTTTCGT GCCCTATCTG ACGGTGCTGC TGGCCACGCA GTTCGTCAGC
AAGTGGTTCA TGATCCTGTT CCTGCCGATG TACATCGCCC TGTTCGTGCT GCTAGGCGCG
GCGATCTTCA TGGCGTTCCG CTATGTCGCG GGCCGCACCA CCTGGCGCGG CGTACGCTTT
CGGGTGAAGG GCTCGGCGTC CGACTACGGT TGGGCCTATC TGGGCTATGG CCTGCTGACC
AGCATCACCT TCGGCTGGTT CGCGCCCGCC ATGACCATGC GCCTGGAAGG CAAGCTGTGG
AGCAGCCTGT CGTTTGGCGA CAAGAAGCTG ACCTGGCAGC GCGAGGCAAA CGAGAACCTC
TATGGCCCGT TCGCCCTGGC CTGGATCGTC GGCATCGTCG GCTACGGCGT CTTCATCGCG
CTGCTGATGC CGTCGTTCAT GGGCGGCCTA CGACCCAACG GGGTTCCCGA CGTGGCCCTG
TTCTTCAAGA TCTACGGCTA CGCCCTGGTC TATGCGCTCG TCGTGACCGT GGCCTCGGCG
GCCTACCACG CCGCGGTGAT GCGGGCGGTG GTCGCGGCCA TCCGCATCGA CGACGCCCGG
TTCTCAACCT CGGTCAAGGC TCTGGACCTG ATCGTGCTGA GTTTGACCAA TGCGCTGATC
GTCGTCTTCT CGCTGGGGAT ACTGACGCCC GTCGTGGCCG CGCGGACCGT GCGGTTCGTG
ATCTCGCGCC TGTCGAGCAC GGGTACGGTG AACCTCGCCG AGGTCCTGCA GGCGCCGCGT
AGCGCCGGCG GCGACGAGGG CCTGGCCGAC GCCTTCGACC TGTCGCCGTT CTAG
 
Protein sequence
MDGAATVAHG ETLTFSQKIK SGDFVGLSFK NFLLNMVTLS LYRFWAKTEV RRRIWDKVSL 
NGEPFEYTGT GKELFFGFLK AMVVIFVPYL TVLLATQFVS KWFMILFLPM YIALFVLLGA
AIFMAFRYVA GRTTWRGVRF RVKGSASDYG WAYLGYGLLT SITFGWFAPA MTMRLEGKLW
SSLSFGDKKL TWQREANENL YGPFALAWIV GIVGYGVFIA LLMPSFMGGL RPNGVPDVAL
FFKIYGYALV YALVVTVASA AYHAAVMRAV VAAIRIDDAR FSTSVKALDL IVLSLTNALI
VVFSLGILTP VVAARTVRFV ISRLSSTGTV NLAEVLQAPR SAGGDEGLAD AFDLSPF