Gene Caul_3336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3336 
Symbol 
ID5900791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3614420 
End bp3615703 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content67% 
IMG OID641563842 
ProductNa+ dependent nucleoside transporter 
Protein accessionYP_001684961 
Protein GI167647298 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1972] Nucleoside permease 
TIGRFAM ID[TIGR00804] nucleoside transporter 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.950841 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCTTCC TTCCCGAGAA CGTCCAGGCC CTGTCGGGCG TGGCGCTGAT CCTCGGCCTT 
TGCTGGCTCG TGTCCGAGAA CCGCAAGCGC TTCCCCTTCG TGTTGGCCCT CGGCGCCATC
GCCATTCAGC TGCTGCTGGT GTTCGTGCTG TTCAAGCTGC CCGCCACCCG TAACGCCCTG
CAGGGCGTGA ACGGCGCGGT CGAGGGCCTG GCCGCGTCGA CCCAAGCCGG CACCAATTTC
GTCTTCGGCT ACCTGTCGGG AACCACGCCG CCCTATGCCG AGACCAATCC GGGGGCCGGC
TTCCTGTTCG CCTTCCGGGT CATGCCGGTG ATCCTGGTGG TCTGCGCCCT GTCGGCCCTG
CTGTGGCACT GGGGCATCCT GAAGCTGCTG GCCAGGGGCC TGGGCTTCCT GTTCCAGAAG
ACCCTGGGCC TGCGCGGCCC GCCGGCGCTC GCCACCGCCG CCACCATCTT CATGGGTCAG
ATCGAAGGCC CGATCTTCAT CCGCGCCTAT CTGGAGCGCC TGACCCGGTC GGAGCTGTTC
ATGCTGATCG CGGTCGGCAT GGCCTGCGTC TCCGGCTCGA CCATGGTGGC CTACGCCACC
ATCCTGCACG ACGTGCTCCC CAACGCCGCC GCCCACGTGC TGGCCGCCTC GCTGATCTCG
GCCCCGGCCG GGGTGTTGCT GGCCCGGATC ATGGTGCCCG GCGATCCCAG CGAGAAGTCC
GACGACCTGG ACCTAGCCGA GGAAGACAAG ACCTATGGCA GCTCGATCGA CGCTGTGATG
AAGGGCACCA CGGACGGGCT GCAGATCGCC CTGAACGTCG GCGCCACCCT GATCGTGTTC
ATCGCCCTGG CCACCATGGT CGACAAGATC CTGTTCGCCC TGCCGATGGT GGGCGGCGAG
CACCTGAGCA TCGCCCGCGT GCTGGGCACG ATCTTCGCGC CGCTGGCCTG GGCCATGGGC
ATTCCGTGGA AGGAAGCCGG CAGCGCCGGC GGCCTGCTGG GCGTCAAGCT GATCCTGACC
GAGTTCACGG CCTTCATCCA ACTGGCCAAG GTGGGTCCCG AGCTGCTGGA CCCGCGCACG
CGGATGATCA TGACCTACGC CCTGTGCGGC TTCGCCAACA TCGGCTCGGT GGGCATGAAC
GTCGCCGGTT TCTCGGTGCT GGTGCCCGCG CGCCGGCAAG AGGTTCTGGG CCTGGTCTGG
AAGGCGATGA TGGCCGGCTT CCTGGCCACC TGCCTGACCG GCTCGCTGAT CGGCCTGATG
CCTCGGTCCT GGTTTGGGCT TTAA
 
Protein sequence
MIFLPENVQA LSGVALILGL CWLVSENRKR FPFVLALGAI AIQLLLVFVL FKLPATRNAL 
QGVNGAVEGL AASTQAGTNF VFGYLSGTTP PYAETNPGAG FLFAFRVMPV ILVVCALSAL
LWHWGILKLL ARGLGFLFQK TLGLRGPPAL ATAATIFMGQ IEGPIFIRAY LERLTRSELF
MLIAVGMACV SGSTMVAYAT ILHDVLPNAA AHVLAASLIS APAGVLLARI MVPGDPSEKS
DDLDLAEEDK TYGSSIDAVM KGTTDGLQIA LNVGATLIVF IALATMVDKI LFALPMVGGE
HLSIARVLGT IFAPLAWAMG IPWKEAGSAG GLLGVKLILT EFTAFIQLAK VGPELLDPRT
RMIMTYALCG FANIGSVGMN VAGFSVLVPA RRQEVLGLVW KAMMAGFLAT CLTGSLIGLM
PRSWFGL