Gene Caul_3315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3315 
Symbol 
ID5900770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3597591 
End bp3598475 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content68% 
IMG OID641563821 
Productpolyprenyl synthetase 
Protein accessionYP_001684940 
Protein GI167647277 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCGACC TCGAAAAGCG CATCGTCCAG GCCGCCGACA TCGTCACCGT GGCGCTCGAC 
GAGTTGCTGC CGCGGGCCGA TGGTCCGGAG AGCCGGCTGA CCGAGGCCAT GCGCTACGCG
GCCCTGGGTC CGGGCAAGCG GCTGCGGCCG TTCTTCGCCC TGGAAACCGG CAAGATGTTC
GACCTGCCCG AGCGGCCGGT CCTGCGCGCC GCCTGCGCCC TGGAATGCAT CCACGCCTAC
AGCCTGGTGC ACGACGACCT GCCGGCCATG GACGACGACG ACGTGCGTCG CGGCCGTCCC
ACCGTTCACA TCCAGTACGA CGAGGCCACT GCGATCCTGG CCGGCGACGC CCTGCAGACC
GCCGCCTTCG AGATCATGGC CCACCCCGAC ACCCACGACG ACGGCCATGT GCGTTCCGAG
CTGGTGCGAA AGCTGGCCAT CGCCTCGGGC GCCAAGGGCA TGGCCGGGGG CCAGATGATC
GACCTGCTGG GCGTCCGCGA CGACCTGGGG GCGGTGGCCC GCATGCAGCG CCTGAAGACC
GGCGCCCTGA TCGCCTTCGC CTTCGAGATC CCGCTGATCA TCGCCCGGGC CAAGGATTCC
GAACGCTCCG CCCTGATGGG TTTCGCCCAG GACCTTGGCC TGGCCTACCA GATCGTCGAC
GACATCCTGG ACGAGGAGGG CGACGAAGCC GTGCTCGGCA AGGCCGCCGG CGGCAAGGAC
GCCGCCAAGG GCAAGACCAA CTATGTCACT CTCCTGGGCC TCGATGCGGC CAAGGAGCGG
GTCAACCTGT TGGCCGCTCA AACCAAATCA CATCTCGATA TTTTCGGCGA ACGGGCTGAA
CATCTGCGCC GTAGCGTCGA TTTCGTGCTG GACCGCCGTA ACTGA
 
Protein sequence
MIDLEKRIVQ AADIVTVALD ELLPRADGPE SRLTEAMRYA ALGPGKRLRP FFALETGKMF 
DLPERPVLRA ACALECIHAY SLVHDDLPAM DDDDVRRGRP TVHIQYDEAT AILAGDALQT
AAFEIMAHPD THDDGHVRSE LVRKLAIASG AKGMAGGQMI DLLGVRDDLG AVARMQRLKT
GALIAFAFEI PLIIARAKDS ERSALMGFAQ DLGLAYQIVD DILDEEGDEA VLGKAAGGKD
AAKGKTNYVT LLGLDAAKER VNLLAAQTKS HLDIFGERAE HLRRSVDFVL DRRN