Gene Caul_3289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3289 
Symbol 
ID5900744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3558401 
End bp3561175 
Gene Length2775 bp 
Protein Length924 aa 
Translation table11 
GC content64% 
IMG OID641563795 
ProductTonB-dependent receptor 
Protein accessionYP_001684914 
Protein GI167647251 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4771] Outer membrane receptor for ferrienterochelin and colicins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGAACC ATAAATCACG GCGCGGCCGG GCCACGGGTT TGCTGGGCGG AGCCTCGCTG 
GCCGCGCTCT GCGCGTTTGG GATCAACGCC AACGCTCAGG CTCAGGAAAC CGCCAAGCCG
GAAGACAGCA CTGTTGAGGC CGTCGTGGTC ACGGGCTCTT TCCTGCGCAA CATCCGCCAG
GAAGACATCG CCTCGCCCAC GGTCTCGATC GACCAGGCGC AGGTGGCGAA GACCGGCGTG
CTTTCGGTGG GCGACCTGCT GCGCTACGTG CCGCAGAACG TCGGCAGCAT GGGCGGCGTG
CAGGATCTGG CCAAGGGCGG CCAGGACAGC AAGGATACAC GCTCGGCGAA CTTGAGGGGG
CTGGGCGCGG GGGCGACCCT GGTGCTGATG AACGGTCGCC GGGTCGTGAA GTCCGATGGC
TACGTCAATC TCAACAGCCT GACGCCGGCG ATCGCCATCG CGCGGGTCGA GACGGTCCTG
GACGGTGCGT CGGCCACCTA CGGCGCGGAC GCCGTGGCCG GTGTGTTCAA CATCATCACC
GACGCCCGTT TCTCGGGCGC CAAGGCTAGT GCTCAGTACA CCTATGTTGA AGGCTCTCCG
GCCTACCAGG TACAGGCGAT GGTCGGCGCG CAGGGCGAGC GCGCGCATCT GGTGGTCGCC
GGCTCCTATA CCGACATCTC GCGTCTGCAA AATTCCGAGC GCGACGTCAC CAACATCTAC
ATTCCGTCAT CGGGCGCCGG CGCCAATCCA GGCTCCTTCA CCCTGACGGC TAGGCCGCGC
ACGTCGACGG GCGGCGACGT GGTGATCAAC AACGTCAACT ATTCGACGCT CTACGACACC
TATAAGACCT CGGCCAACAC CCTGGCGGTC GTCGATCCCA ATTGCGGCTC GGCCGCGACC
AAGAGTGTGT TCACGCCATC AGCCGCCGGA CCAGGCTACG CTATCGGTTC ATGCGCCTTC
AGCTTCCAGG CCCAAAACCC CATCCGCGGC GCTAGCCAGA ACTATCTGCT GCACGCCGAG
GGTGACTATC TGCTGACCGA CAATCACACG CTGTTCTTTG AAACTAGCAT CAATCACCAG
GACTCTCAGC GCTACGGCGT GCCGTCCTAC TCACAGAACC ACAATGGTGC GACGCCGCCC
GTGGTGCCGG CCTCCAATCC GTACAATCCC TTCGGCGTGG CGGTCTACTA TGTCGGGCGG
CCGATCGGCT CTGAGGGCCT CGCTGGCACG ATGTACAATA TCCAGCGCAA CGAGGTGAAC
CAGTTCCACA ATGTGCTGGG CGCCAAGGGT TCGCTGTTCG CTGACTGGCG CTACACCGCC
ACCTTCACCT CGTCACGATC GACGAACATC TTCCGCGACC ATGATACGGA CATGAACCTC
TTCCAGGCGG CGCTGAACGG CTATGGCGGC GCCAACTGCA ACTATCGCTT CAACGGTCCC
GGCGTCGGCG CGGTCGCGGG GCAGGGTAAC TGCTACTATC TGAGCCCGTT CGCCAAGGAC
AACGCCAGCC AGAACGCGGC GATCCTCCAC AACATCCAAA CCGAGGTCGT GACCCGCACC
CAACGTGACT ACCTGATCGG TGACGTCGTC GTGGACGGCA CCCTGGGGGA GATCAAGCTC
CCAGGCGGCC CGATCTCGGC GGCGTTTGGC GTGCAGTCGC GACGTGAAGG CCAGAAGATC
ACCTATTCGG ATCTGCTCAA GAGCGGGTAC GCCGCCTTTG GCGGGCCGTC GGTCGATCTG
GACGGCGAAC GCACCATCAA CAGCGTTTTT GGTGAGTTCA ACTTCCCGAT CATCGAGGGT
CTGAACGTAG ACGTCGCCCT GCGGCACGAA GACTACGGCG GCTTTAAAAC CACCGACCCG
AAGGTGGCGA TCAACTATCG GCCGGTGGAG AGCCTGTCGT TCCGCGCCTC GGCCAGCACC
GCCTTCCAGG CCCCCAGCCT GGAAAGCACT TCCAGCGGCC CGATCAGCAA CAACGTCGTC
AACATCACCG ACCCGGTGCA GGGTAACACC ACCTTCCGCA CAGTGACGAC GGTTGGCAAT
CCCGACCTGC AGCCGCAGAC CGCCAAGGTG CATAACTTCG GGGCAACCTG GCTGCCGGTG
TCGCGCGCCT CGCTGTCGCT GGACTGGTGG ACTTTCAAGT ACGACAACCA GATCGCCATC
GAGAACGGCC AGGCGGTGAT TAACGCCAAC CCGACCGGCA GCCAGGTGAT CCGCGACCAA
AGCGGCGCGG CCCAGACGGT GCTGGTGCGC AGCTACAACG CCAAGAGCGG CACCCAGACC
TCGGGCCTCG ACCTGATGGC GACCTACGCC TTCGATTGGG GCGCCAGCAC CTTCACCCTG
CGCGACAGCC TCAGCTATCT GCTGAAGTAC GACATCGACA CCGGCTCGGG CGTCTATGAC
GGGGTGGGGC GGCGCAACAA CGCCATCACC TCGCCGCTCA CGGCCGCCGC CGCGCCGCGT
TATCGCAACA CCGCCGGCGT CGACTGGTCG ATGGGGCGTC ACCAGGCCAG CGCCACGGTG
CGTTACGTGT CCGGCGTGGA GGACGACTAC GCCATCGCCG TCACCGCCAA GGCCGCCACC
AAGGTCAAGT CCTGGACGGT GCTGGATCTG CAATACGGCG TCGGCCTTGG CGAGGACGAG
CGCTATCGCC TGACCGTCGG CATGATCAAC GCCTTCGATA AGGCCCCGCC GTCCGCCAAG
TACACCGGCT ATCTGCAGGC CCTGGCCGAC CCGTTCGGTC GTCAATCCTA TGTCCGACTT
GAGGCGCGGT TCTAA
 
Protein sequence
MGNHKSRRGR ATGLLGGASL AALCAFGINA NAQAQETAKP EDSTVEAVVV TGSFLRNIRQ 
EDIASPTVSI DQAQVAKTGV LSVGDLLRYV PQNVGSMGGV QDLAKGGQDS KDTRSANLRG
LGAGATLVLM NGRRVVKSDG YVNLNSLTPA IAIARVETVL DGASATYGAD AVAGVFNIIT
DARFSGAKAS AQYTYVEGSP AYQVQAMVGA QGERAHLVVA GSYTDISRLQ NSERDVTNIY
IPSSGAGANP GSFTLTARPR TSTGGDVVIN NVNYSTLYDT YKTSANTLAV VDPNCGSAAT
KSVFTPSAAG PGYAIGSCAF SFQAQNPIRG ASQNYLLHAE GDYLLTDNHT LFFETSINHQ
DSQRYGVPSY SQNHNGATPP VVPASNPYNP FGVAVYYVGR PIGSEGLAGT MYNIQRNEVN
QFHNVLGAKG SLFADWRYTA TFTSSRSTNI FRDHDTDMNL FQAALNGYGG ANCNYRFNGP
GVGAVAGQGN CYYLSPFAKD NASQNAAILH NIQTEVVTRT QRDYLIGDVV VDGTLGEIKL
PGGPISAAFG VQSRREGQKI TYSDLLKSGY AAFGGPSVDL DGERTINSVF GEFNFPIIEG
LNVDVALRHE DYGGFKTTDP KVAINYRPVE SLSFRASAST AFQAPSLEST SSGPISNNVV
NITDPVQGNT TFRTVTTVGN PDLQPQTAKV HNFGATWLPV SRASLSLDWW TFKYDNQIAI
ENGQAVINAN PTGSQVIRDQ SGAAQTVLVR SYNAKSGTQT SGLDLMATYA FDWGASTFTL
RDSLSYLLKY DIDTGSGVYD GVGRRNNAIT SPLTAAAAPR YRNTAGVDWS MGRHQASATV
RYVSGVEDDY AIAVTAKAAT KVKSWTVLDL QYGVGLGEDE RYRLTVGMIN AFDKAPPSAK
YTGYLQALAD PFGRQSYVRL EARF