| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3138 |
|---|
| Symbol | |
|---|
| ID | 5900593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 3402897 |
|---|
| End bp | 3404540 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641563641 |
|---|
| Product | Na+/H+ antiporter |
|---|
| Protein accession | YP_001684763 |
|---|
| Protein GI | 167647100 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
|---|
| TIGRFAM ID | [TIGR00831] Na+/H+ antiporter, bacterial form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0585872 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTCCC TGTTGCAAGC CATCGCCACC ATCCTGACCC TGTTGTTGGC GGTGATCGTC
AGCGGCGCCC TGGCTCGCTT TTCCCGACTG CCGCTGCCCC TGGTGCAAAT CGCCCTGGGC
ATCGTCATCG CCCTGTCTCC GCTCAGGACG GTGGAGCTCA AACCCGAGAT TTTCTTCCTG
CTGTTCCTGC CGCCGCTGCT GTTTCTCGAC GGCTGGCGCA TCCCCAAGAC CGCGCTGCTG
CGAGACCGCG CCATCATCCT GGAGCTGTCG CTGGGCCTGG TGATCATGAC GGTGATCGGG
GCGGGCTTCC TGATCCACTG GCTGATCCCG GCCATGCCCC TGCCCGTCGC CTTCGCCCTG
GCCGCCGTGG TTTCGCCCAC CGATCCGATC GCGGTGTCGT CGATCGCCAA CCAGGCGCCG
ATCCCCAAGC GGATGATGCA CATCCTCGAG GGCGAATCCT TGCTCAATGA CGCCTCGGGC
CTGGTCTGCA TGCGCTTCGC CGTGGCGGCG ATGCTGACCG GATCGTTCTC GCTGTCCGAC
GCCTTTCTGA CCTTCCTGTG GGTGGCGCTG GGGGGAGTGG CGATCGGCGT CTGCGTCACC
TGGGCCGTCA CCTGGATCAA GCAGCGGGTC ACCGACAGCC TGGGTGAGGA CACCGGCGCC
CAGATCCTGA TCAGCCTGCT GATGCCGTTC GGGGCCTATC TCGCGGCCGA ACATTTCCAT
TGCTCGGGCA TCCTGGCCGC CGTCGCCGCC GGCGTCACCA TGGGCCTGGT CGAACAATCC
GGACAGGCGC TGGGCGTGAC CCGCGTGCAT CGCGCCGCCG TCTGGGACAC CGTGCAGTTC
GCCGCCAACG GCGTGATCTT CGTCCTGCTG GGCGAGCAGC TGCCTGGCAT CGTGGCCGGG
GCCGCCAAGA CGGTGCTGCT GACAGGACAC CACGAGGTGT GGTGGCTGGC GGTGTATGTG
CTGCTGATCA ATGTCGGCCT GGCCGCGCTG CGCTTCGCCT GGGTCTGGAC CTCGCTGCGC
TGGACGCTGT TTCGCGCGAT CCGACGGGGC GACCCGCCAC GCAAGACGAG CTGGAAGCTG
GTCCTGGCCA TGTCGCTGGC CGGCGTACGC GGCGCCATCA CGCTGGCCGG CGTTCTGACC
CTGCCTCTGA CCTTGACCAG CGGTGAAGCC TTCCCCGCTC GCGACCTGGC TATCTTCCTG
GCCGCCGGGG TGATCGTGGT CTCGCTGGTG GTCGCCAGCG TCGCCCTGCC CCGGGTGCTT
AAGGGCCTGT CCCTGCCGCC AGAGCCCTCG CATCAAGCCC AGGAGGACGC CGCCCGCGCC
GCCGCGGCCG CCGCCGCCAT CCGCGCCATC GAGGCGGCCC AGCACACCAT GGCCGAGGGC
CGGGCCGACG CCGACATCTA TACCGACACC GCCGCCCGGA TCATGGCCCT CTATCGCCAA
CGGATCGACG GCACGAGGGA AAGCCCCGAA GCCAAGGAGA TCAGCCGCGG CGCCCAGCGC
ATCGAGCGGC AATTACGCCT GGCGGGCGTT CGCGCCGAAC GCGACGAGGT CTTCCGCCTG
GGACGCGAAC GCGACCTGGA CGAAGAGGCC GCGCGCCGCA TTATCCGCGA ACTGGACCTG
CTGGAAACAC GCTACAGTGC GTGA
|
|---|
| Protein sequence | MESLLQAIAT ILTLLLAVIV SGALARFSRL PLPLVQIALG IVIALSPLRT VELKPEIFFL
LFLPPLLFLD GWRIPKTALL RDRAIILELS LGLVIMTVIG AGFLIHWLIP AMPLPVAFAL
AAVVSPTDPI AVSSIANQAP IPKRMMHILE GESLLNDASG LVCMRFAVAA MLTGSFSLSD
AFLTFLWVAL GGVAIGVCVT WAVTWIKQRV TDSLGEDTGA QILISLLMPF GAYLAAEHFH
CSGILAAVAA GVTMGLVEQS GQALGVTRVH RAAVWDTVQF AANGVIFVLL GEQLPGIVAG
AAKTVLLTGH HEVWWLAVYV LLINVGLAAL RFAWVWTSLR WTLFRAIRRG DPPRKTSWKL
VLAMSLAGVR GAITLAGVLT LPLTLTSGEA FPARDLAIFL AAGVIVVSLV VASVALPRVL
KGLSLPPEPS HQAQEDAARA AAAAAAIRAI EAAQHTMAEG RADADIYTDT AARIMALYRQ
RIDGTRESPE AKEISRGAQR IERQLRLAGV RAERDEVFRL GRERDLDEEA ARRIIRELDL
LETRYSA
|
|---|
| |