Gene Caul_3007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3007 
Symbol 
ID5900462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3273172 
End bp3274374 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content73% 
IMG OID641563504 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001684632 
Protein GI167646969 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.469036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG GTCCCTCCCG CCAACGGGTC GATATAGCCA TCCTCGGCGG CGGCATGGCC 
GGCGCGGCCC TGGCCGCCCA TCTGGCGCCG GGGACGCGCG TGGCGCTGAT CGAGCGCGAG
CCGGTCTTGG GCTATCACAC CACCGGCCGC TCGGCGGCGA TGTTCATTCC CTCCTATGGC
GGCCCGGCGA TCACCGGGCT GACGGCGGCC AGCCGCGACT TCTTCCTCAA CCCGCCGCCG
GGCTTTGGCC CGCCGCTCTT GACGCCCCGG CCGGTCATGC ATGTGGCGGG GCCGGACCAG
ATCGACCGGC TGGACATCTT CGCCGCCGCC CACTCGGTCG ATCGTCGGAG CGGGGCGTTC
GAAGTCCTCG ATGGGCGGGC GGCGCGGGTC CGTGTGCCCA TACTTCGGTC CGGTGCGGTG
GCCGCGGCGC TGATCGAGGC CGGGACCGGC GATCTCGACG TCGCCCGGCT GCATGCGGCC
CTTGTGCGCC GCGTCAAGCA GGTCGGCGGT GTGGTGCTGG CCAATGCGGG GGCCGGCGCC
ATCACCTTCG ACCGATCGGA GTGGCGGGTG CGCGGTCCGG ACCTGGACAT CGCCGCGCCC
ATCCTGGTCA ACGCCACCGG CGCCTGGGCC GACGAGACCG CGATCGCCGC AGGCCTGGGT
CCCCTCGGGC TGACGCCGCT GCGCCGGACG GTGATGCTGG CCAGGGCGCC GGACCTGGCG
GGCTTCGCCG CCTGGCCGGT GGTCAAGGAT ATCGACGAGC GGTTCTATTT CCGGCCCAGC
GGCGGCCGGC TGTTGATCAC CCCGGCCGAC GAAACGCCGA GCGCGCCTTG CGACGCCGTC
GCCGACGAAA TGGACATCGC CCTTGGCATG GCCCGGTTCG AAGCCGCCGT CGACCATCCG
GTGGCTCATC TGGTCGGACG ATGGGCGGGC CTGCGGACCT TCGCCCCCGA TCGCGCCCCG
GTGGTGGGTT GGTCGACAAG CCGCCCCGGC TTCTTCTGGC TGGCGGGCCT TGGCGGCTTT
GGCATCCAGA CCGCGCCCGC CATGGGCCGC CTGGCCGCGG CCCTGGTCGA GGGGCGCCCG
GTTCCCAGCG ACCTGGTCGA CCATGGCGTC CAGGCGCAGG CCTATGCGCC CAGACGCTTG
GAGCAAGCCG TAGCGTCGTC TTCAGCGGCG CGCCGATTGA GCAGCGAACC GCAAAAGGCC
TGA
 
Protein sequence
MTAGPSRQRV DIAILGGGMA GAALAAHLAP GTRVALIERE PVLGYHTTGR SAAMFIPSYG 
GPAITGLTAA SRDFFLNPPP GFGPPLLTPR PVMHVAGPDQ IDRLDIFAAA HSVDRRSGAF
EVLDGRAARV RVPILRSGAV AAALIEAGTG DLDVARLHAA LVRRVKQVGG VVLANAGAGA
ITFDRSEWRV RGPDLDIAAP ILVNATGAWA DETAIAAGLG PLGLTPLRRT VMLARAPDLA
GFAAWPVVKD IDERFYFRPS GGRLLITPAD ETPSAPCDAV ADEMDIALGM ARFEAAVDHP
VAHLVGRWAG LRTFAPDRAP VVGWSTSRPG FFWLAGLGGF GIQTAPAMGR LAAALVEGRP
VPSDLVDHGV QAQAYAPRRL EQAVASSSAA RRLSSEPQKA