| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2951 |
|---|
| Symbol | |
|---|
| ID | 5900406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 3201864 |
|---|
| End bp | 3203597 |
|---|
| Gene Length | 1734 bp |
|---|
| Protein Length | 577 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641563448 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_001684576 |
|---|
| Protein GI | 167646913 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.982174 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGC CGGGCCAGGA CACGCAACCG CCGGCCACCT TGGTCGCGGG CATGCTGGCG
GCCGCCGCCG CCTATCCGGA GAACGGTTTC ACCTTCCAGG ACGCGGCGGG CCGCGAGACC
TTCTACAGCT TCCCCGACCT GCTGCTGGCC ACCGAGCGCG CCGCCGCGGG CCTGCAAAGC
CTGGGCCTGG GCCACGGCGA CCGGATCGCC CTGCTGACCC AGGATCCCGA GGAGTTCATC
ATCGCGTTCC TCGGGGCGGT GCGGGCCGGG ATCGCGCCCG CCCCGCTCTA TCCGCCGCCG
CCGCTGGGCG GCATAGAGAT CTATCTGAGC CAGACCGTCG CCCTGCTCGA TGTGGCGCGC
CCCGCCGCCC TGATCGGCTC GGCCAAGGTG CTGGGCGACA TCCAGGCCGC CGTCGCCGGC
CTGGACGGCG TCAAGGCCGT CGCCACCGTG CAGGAGATCC GCGCCTGCCA GGCGCCGATG
ACGCCCTGCG AGGTCGGCCC GGACGACGTG GTCTTCCTGC AGTTCACCTC GGGCTCGACC
AGCACGCCGC GCGGCGTGAT CGTCACCCAC CGCGCCCTGG TCGCCAATAT CGCCTGCTTC
ATGGACCAGT CGCTGCAAGC CGATCCGGCC CGCGACAAGG GCGTCACCTG GCTGCCGCTC
TATCACGACA TGGGGCTGAT CGGCTTCGTG CTGGGACCCG TCCATACTGG CGTCTCGGTG
GTGTTCATGC CGACCGTGCG GTTCGCCAAG TCGCCGGCCG CCTGGCTGGA CGCCCTGCAC
CAGCATCGCG GCACCATCAC CTTCGCCCCC AACTTCGCCT TCGCCCTGCT GCTGCGCCGG
CTGCGGGCCG AGGATCTGGG GCGCTGGGAC CTGTCCTGCG TCAAGGCCCT GGGCTGCGGG
GCCGAGCCGA TCCACCCCGA CCTGATCGAG CGCTTCCTCG ACGTCTTCGC CGCCGCCGGG
CTGAGCCGCG ACGCCTTCCT GCCCGCCTAC GGCCTGGCCG AGGCCACCCT GGCCGTGGCC
CTGCGCCGGC TGGGCGCGCC GGTCAGCACC CAGCGGGTTG ACCGCGAGAC CTTCGAGCGC
ACCGGCGTCT CCACGCCCGC GCGGGAAGAC CGTTCCTGGC TCGATCATGT CGGGTTCGGC
GGCCCCTTCG CGGGACATGA AATCGCTATC CGCGACCCCG ACGGCGCGGC CCTGCCCCAT
GGCCGCGAAG GCGACATCTG GCTGCACGGC CCCTCGGTCT GCGCCGGCTA TCTGGGCGAC
GAGGCCGGCT GGAACGCTAT CTGCCGGGAC GGGTGGCTCA ACACCGGCGA CCGGGGCTAT
CTGGCGGACG GCGAGCTGTT CGTGTCCGGA CGGTCCAAGG AACTGATCAT CGTCAACGGC
CGCAACATCC ATCCCCAGCC GTTGGAATGG GCGGTCAGCG CGCTGTCGGG CGTGCGGCCT
CAATGCGTCG CGGCCTTCGC CGTGCCGTCC CTGACCACCG AGGCCATCGT CATCGCCCTG
GAAGCCAAGG GCCGGCCGAC GACCGATCTG GTGGCCGCCG TCGAGGACGC GGTCGAGGAC
CTGGTCGCCT GCCGGCCGCT CGACGTCGTC CTGCTGCCGT CCGGCTCGCT GTCGCGCACC
ACCTCCGGCA AGCTCAAGCG CGGCCACGTG CGGCGGCGGT ATCTGGACGG CGACCTGCCC
AGATTGGAGC CGACGCCCGT CTCCATGCCC GTTGGGGAGG CAGGCCAACC GTGA
|
|---|
| Protein sequence | MNPPGQDTQP PATLVAGMLA AAAAYPENGF TFQDAAGRET FYSFPDLLLA TERAAAGLQS
LGLGHGDRIA LLTQDPEEFI IAFLGAVRAG IAPAPLYPPP PLGGIEIYLS QTVALLDVAR
PAALIGSAKV LGDIQAAVAG LDGVKAVATV QEIRACQAPM TPCEVGPDDV VFLQFTSGST
STPRGVIVTH RALVANIACF MDQSLQADPA RDKGVTWLPL YHDMGLIGFV LGPVHTGVSV
VFMPTVRFAK SPAAWLDALH QHRGTITFAP NFAFALLLRR LRAEDLGRWD LSCVKALGCG
AEPIHPDLIE RFLDVFAAAG LSRDAFLPAY GLAEATLAVA LRRLGAPVST QRVDRETFER
TGVSTPARED RSWLDHVGFG GPFAGHEIAI RDPDGAALPH GREGDIWLHG PSVCAGYLGD
EAGWNAICRD GWLNTGDRGY LADGELFVSG RSKELIIVNG RNIHPQPLEW AVSALSGVRP
QCVAAFAVPS LTTEAIVIAL EAKGRPTTDL VAAVEDAVED LVACRPLDVV LLPSGSLSRT
TSGKLKRGHV RRRYLDGDLP RLEPTPVSMP VGEAGQP
|
|---|
| |