| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2782 |
|---|
| Symbol | |
|---|
| ID | 5900237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 3019759 |
|---|
| End bp | 3020466 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641563274 |
|---|
| Product | LexA repressor |
|---|
| Protein accession | YP_001684407 |
|---|
| Protein GI | 167646744 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
|---|
| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0386684 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000588647 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACGC GCAAGCAGCA CGAGCTGCTG ATGTTCATCC ACGAACGGAT CAAGGAGAGC
GGCGTCTCTC CCTCCTTCGA CGAGATGAAG GAGGCGTTGG ACCTGGCTTC CAAGTCGGGC
ATCCACCGGC TGATCACCGC TCTTGAAGAG CGCGGCTTCA TCCGCCGGCT CGCGCACAGG
GCCAGGGCGC TCGAGGTGGT CAAGCTGCCG CAGCAGGCCA CGACCGCCGC CCCGCCCAAG
GGACGCGGCG CGTTCCGGCC GCAGGTGCTC GAAGGCGGCG GCCAGGCGCC GACCACCTCG
GCCCAGCCCC AGATGGCGGC CGACAACAGC CGCGAACTGC CGATCCTCGG CCGCATCGCC
GCCGGCACCC CCATCGACGC CATCCAGCAC GAACGCGAGC GCTTGCCGGT GCCGGAATCG
ATGCTCGGCG CCGGCGAGCA CTACGTGCTC GAGGTGCAGG GCGACTCGAT GATCGAGGCC
GGCATCCTCG ACGGCGACTA TGTGATCATC AAGAAGGGCG ACACCGCCAA CAGCGGCGAG
ATCGTCGTGG CCCTGGTCGG CGAGGAAGCC ACCCTCAAGC GCCTGCGCAA GAAGGGCGGC
TCGATCGCCC TGGAAGCCGC CAACCCCAAA TACGAGACCC GCATCTTCGG TCCCGACCAG
GTCGAGGTCC AGGGCAAGCT GGTGGGGCTG ATCCGGCGGT ATCATTAG
|
|---|
| Protein sequence | MLTRKQHELL MFIHERIKES GVSPSFDEMK EALDLASKSG IHRLITALEE RGFIRRLAHR
ARALEVVKLP QQATTAAPPK GRGAFRPQVL EGGGQAPTTS AQPQMAADNS RELPILGRIA
AGTPIDAIQH ERERLPVPES MLGAGEHYVL EVQGDSMIEA GILDGDYVII KKGDTANSGE
IVVALVGEEA TLKRLRKKGG SIALEAANPK YETRIFGPDQ VEVQGKLVGL IRRYH
|
|---|
| |