Gene Caul_2727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2727 
Symbol 
ID5900182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2964285 
End bp2965262 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content69% 
IMG OID641563219 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_001684352 
Protein GI167646689 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.135065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACT CCCAGACTGA CATCGAGGCC GCGATCGACT GGCTTGTCCG CTTGCAGGGA 
GACGCCGTCA CAGAAAGCGA TTGGCGCGAC TTCGACGCCT GGCTGACGGC TTCGCCCGCC
CACGCGGAGG CCTATGACGC CGCGCTGGCC TTTGACCAAC GTCTGGATCT CGACGCCCGG
CTCGCCGACC GTGCGTCGGA ATCGGCCCCG CCCGTCGCCA AGGTGATCCC GCTGCGCCCG
ACTCGGCGTG CTTGGCTGTG GCCGGCCGCC GCCGCGGTCG CGGCGACCTT CGTCGCCGGC
GCGGTCCTGC TCCCCGGCGC CCTGATGGGC GAACGCGAGG CCACCTATGT GACCGGCGTC
GGCGAGCACA AGACGATCGC CCTGGAAGAC GGCACGCGGA TCGAATTGAA CGCCGCCTCG
CGCCTGACCG TGCGGTTCGA GCGCCACGCG CGGCGCGTCC GGCTGGGCGA CGCCGAGGCC
TTCTTCGACG TGGCCAAGGA TCCCCGTCGG CCGTTCCTGA TCGAGGCTGG CGACACGCAG
GTGCGCGTGG TCGGCACCCA GTTCGACGTT CGGCGGCGGG ACGGTCGGGT CGCGGTGGCC
GTCCAGCGTG GGCTCGTCGA GGTCCGCCCC GATTTGCAGA GCGGGGCGAC GCCGTTTCGG
CTGAGGCCGG GGCAGGGCCT TTCCCACGAG GAGGGCCGAG CAGATGACGC GCGCGTCGCA
GCGGTCGCCG TCGATGAGGT CATGGGCTGG CGACAGGGGC GGTTGATTTA TCGCGACCGA
CCGCTTTCCG AAATCGTCAG GGATTTGAAC CGTCTGTTCC CGCGTCCGGT GAAGCTGGGC
GACGACAGGG CGGCGGATAT GCGACTCTCC GGCGTGTTGA TCGTCGACGA ACAGGGTGCG
ATGGTCGATC GACTGTCACA TTTGCTTCCC GTCCGAACGA CGACGACCGA CGACGCCATC
GTGATCCGGG CGCGGTAG
 
Protein sequence
MTHSQTDIEA AIDWLVRLQG DAVTESDWRD FDAWLTASPA HAEAYDAALA FDQRLDLDAR 
LADRASESAP PVAKVIPLRP TRRAWLWPAA AAVAATFVAG AVLLPGALMG EREATYVTGV
GEHKTIALED GTRIELNAAS RLTVRFERHA RRVRLGDAEA FFDVAKDPRR PFLIEAGDTQ
VRVVGTQFDV RRRDGRVAVA VQRGLVEVRP DLQSGATPFR LRPGQGLSHE EGRADDARVA
AVAVDEVMGW RQGRLIYRDR PLSEIVRDLN RLFPRPVKLG DDRAADMRLS GVLIVDEQGA
MVDRLSHLLP VRTTTTDDAI VIRAR