| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2391 |
|---|
| Symbol | |
|---|
| ID | 5899846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 2599403 |
|---|
| End bp | 2602267 |
|---|
| Gene Length | 2865 bp |
|---|
| Protein Length | 954 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641562882 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_001684016 |
|---|
| Protein GI | 167646353 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3903] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.814373 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGGGACG CGCGCGCTTT GAGCCGGGGT CAGGCCTGCG ACGAAAGCCA AGCCGCCTTC
GGACCCTACC TGTTGGCGCC CGGCCGGCGG CTGCTCACGC GCCAGGGCGT TCCGGTGGCG
GTGGGCGCTC GAGCGCTCGA GATCCTGATC GCCCTGTTGA GCGAGCACGG CCGCGTGCTC
ACCCACCGGC AACTGGTTGA GCGCGCCTGG GCGGGTCTGA CGGTCGAGGA GTCCAACCTG
CGCGTGGCCG TCTCGGGCCT GCGAAAGACC CTGGGGGACG GCGAGGGCGG CGCCCGCTAT
ATCGAGAACG TGGTGGGACG GGGCTACTGT TTCGTGGCCC CAGTCCGATG GCTGGAGGCC
GAGCCGGCCG ACGCTTCGCC TTCGATCGTA CCCGCCAAGC TCCGCGGCGG TTCCACGCGT
CTACCGATCC CCGCCGCGCG CGTCATCGGG CGCGAAAACG TCGTTGAAAA GCTCGTTGCG
GCCCTGGGCG ATCGAGCGCT GGTCACGGTG GTCGGGGCGG GCGGACTGGG CAAGACGACC
GTCGCGGCCC TGGTGGCGCA GGCCCTTAAG ACCCGAGCAG GGGTCGAGGC CGTCTTTGTC
GATCTCAGCG CGACGGCGGA CGAGGCGGCC TTGACGAAGG CCGTGGCGGT CGCCCTGGGC
CTGGACGGGC CTGGGCGGGA TTTGGAGGAG GCAATCCTTA CCTGCCTGGC GAACCATCGC
GTGTTGCTCG TCTTGGACGG CTGCGAGCAT GTCGTCGAGG CGGTCGCGGC GTTTTGCGAC
CGCCTCACTC GCCGGCTTGA TCTCTATCGG GTCCTGGCCA CCAGCCGCGA GGCGCTGCGG
GTGGAGGCCG AGACCGTGCA CCTGCTGGAG CCGCTCGCCT TTCCGTCCGC CGATGGGGAT
CCCTCGCTGG AGAGCCAGTT GGGCTATTCG GCGGTGCAAC TGTTCGTCGA ACGCGCGGAG
GTCAGCGGTC GGCGTGGGCC TTGGACGCCG GTGGAAGCGC GGCTGGCGGG CGATATCTGC
AGGCGGTTGG ACGGCGTGGC CTTGGCCATC GAACTCGTCG CCAGCCGCGT CGGCGCCTTG
GGCCTGGCGG GCGTGGCCGA TCTGCTCGAC GATAGCCTTG GTCTCCAGTG GCCCGGCCGA
CGTGACGCCG CGCCCCGTCA CCAGACGCTG CAAGCCCTGC TGGACTGGAG CCACGACCTG
CTGGGCGAGC GCGACCGGCG CGTTCTGCGC CGCCTTTCGC TGTTCACAGG ACTGTTCACC
CTGCGCGACG CCCACGCGGT GGCGGGCGAG CCGGGCGACG ACACGCTCGA CGTCGCCAAC
GCCCTGACCA GCCTGGTCGA CAAGTCGCTG GTCTGGACCT CGCACGGCGG CGTCGGGCCG
GTTCAGTTCA GGCTGCTGGA CACCACGCGT GTCTATGCCC TCGCGAAGCT GACGCGGAGC
CAGGAAACCG ACGTGATCGC TGAGCGCCAC GCCGGGCAAG TTCTCGCGCG TCTGACGGCC
GATGAGGTCA GCGACAACGC CTCGCTATTC CAGAGGGGCG CGCCCTTGGC CTCAGCCACG
GTGGGCGACG TGCTCTCGGC GTTGCGTTGG GCTCAGGCCG CGCGTCCCCG GGACCTGTTC
GTCAGCCTGG GCGTCGCCGC CGCGCCCTTG CTGTTGTCGC GCGCCATGCT CGACGAGTGC
GAGGCCTGGT GCCTACGCGC GCTGACCGCC CTGCCGGACG AACGCCGCGG CGGCCTGGAA
GAGCTCAGAT TGCTGGAAGC GGTGGGCGTC GCCCGCATGT TCGGACGCGG CAACCATGAG
ACCGTGCGTG AAATCATCGA TCGCGGGATG GCGCTCGCGC AAGCGCTCGG CGCCACGACC
GAACAGGTGC ACCTGCTGGC CGGCCAGCAT ATTTTCCTCA CGCGGATCGG CGACTTTTCC
GCGGCGCTGG ACTGTGGGCG CCGATGCGCT GAGCTCTGCG ATCCGGTTCG GGATCCGAGC
GGCGCGGCGC TGGCCCAGTG GATGCTGGGG ACCTCGATGC ATCTGGTGGG AGACCAACGC
CTGGCGCAGG AAGCGGTGGA GCGGGGTTTC GGCTACTGGG CCGCTTCGGA CGCCGATGGC
GCGGACTTCT TCGGATATGA TCACAAGGTG CGCGCGATGA TCGTGCTGTG CCGGGTCCTC
TGGCTTCGCG GCGAACGCGC GCGATCGGCC GAGATGGCCG AGGCCGCCGT GGCCGAGGCC
AAGCGTGGCG GCCGGCCGGT CAGCTTGTGC ATCGCGCTGA TCTATACGGC CACCGTGGCG
TTGTGGGACG AGAATTGGGA CGAGGCCGAG CGTCTCGTAG CCCGGTTGAT CGAGCACGCC
GCCCGACACG GGATCGGCCC CTATCACGGC GTGGGTCTGG CGCTGGAGGG GGAGCTGGAC
ATCGGACGGG GGCATCTGCG CCAGGGCGTC GAAGCGCTTG GCCGAGCGCT CGAACGCCTC
GATCGGGAAG CCCATCGTCT CCTTTCGCCG GCCTTCGCCG GAAGTCTCGC CAGGGGACTT
CACGCGCTGG GAGAAGGCGC GAAGGCGCAG CGTCGCATTC TCGCGGCGCT GGACGAAACC
AAGGCGGTTG GCGACCACTA TGATCTGCCC AGACTCTACC TGATCGCCAG CGAGATCGCT
GGAGACGACC CTCGGGCTTC GAAGGCTTAC GCGATCCAGG CCCTTGAGGC CGCGCACGCG
AGCTCGGCCC TGAGTCTGGA ACTGGCCGCG GCCATGAGGC TCTGGGCGCT GGAGGGCGAC
AGCGCGGCCA CCCGTCAGCG CCTCGAAGGC CTGTGGAGGT TGGCGCCCGA TCACGACGCG
CCCCTGGCGC GGCGCGCCCA CGCCTTATTG TGCGCTACGG CCTGA
|
|---|
| Protein sequence | MGDARALSRG QACDESQAAF GPYLLAPGRR LLTRQGVPVA VGARALEILI ALLSEHGRVL
THRQLVERAW AGLTVEESNL RVAVSGLRKT LGDGEGGARY IENVVGRGYC FVAPVRWLEA
EPADASPSIV PAKLRGGSTR LPIPAARVIG RENVVEKLVA ALGDRALVTV VGAGGLGKTT
VAALVAQALK TRAGVEAVFV DLSATADEAA LTKAVAVALG LDGPGRDLEE AILTCLANHR
VLLVLDGCEH VVEAVAAFCD RLTRRLDLYR VLATSREALR VEAETVHLLE PLAFPSADGD
PSLESQLGYS AVQLFVERAE VSGRRGPWTP VEARLAGDIC RRLDGVALAI ELVASRVGAL
GLAGVADLLD DSLGLQWPGR RDAAPRHQTL QALLDWSHDL LGERDRRVLR RLSLFTGLFT
LRDAHAVAGE PGDDTLDVAN ALTSLVDKSL VWTSHGGVGP VQFRLLDTTR VYALAKLTRS
QETDVIAERH AGQVLARLTA DEVSDNASLF QRGAPLASAT VGDVLSALRW AQAARPRDLF
VSLGVAAAPL LLSRAMLDEC EAWCLRALTA LPDERRGGLE ELRLLEAVGV ARMFGRGNHE
TVREIIDRGM ALAQALGATT EQVHLLAGQH IFLTRIGDFS AALDCGRRCA ELCDPVRDPS
GAALAQWMLG TSMHLVGDQR LAQEAVERGF GYWAASDADG ADFFGYDHKV RAMIVLCRVL
WLRGERARSA EMAEAAVAEA KRGGRPVSLC IALIYTATVA LWDENWDEAE RLVARLIEHA
ARHGIGPYHG VGLALEGELD IGRGHLRQGV EALGRALERL DREAHRLLSP AFAGSLARGL
HALGEGAKAQ RRILAALDET KAVGDHYDLP RLYLIASEIA GDDPRASKAY AIQALEAAHA
SSALSLELAA AMRLWALEGD SAATRQRLEG LWRLAPDHDA PLARRAHALL CATA
|
|---|
| |