| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2142 |
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| Symbol | |
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| ID | 5899597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | + |
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| Start bp | 2317924 |
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| End bp | 2321028 |
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| Gene Length | 3105 bp |
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| Protein Length | 1034 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641562632 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001683768 |
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| Protein GI | 167646105 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000142845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0159239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCCAATC CACGAAACAG GTCCGCCTTG GCGCGGGGCA TGACGCTGGC GCTGCTGGCG
GGCGCCTCGT CCACGGCCTT GGCCACGGGC GCCTGGGCCC AGACCGCGCC GGACGCGGGG
TCCCAGGTCG AGGAAGTCGT CGTCACCGGC ATCCGCGGGT CGCAGATGCG CTCGGTCGAC
GTCAAGCGGC GCGAGGCGTC GATCGTCGAC GCGATCTCGT CGGAAGACAT CGGCAAGCTG
CCCGACGTCA CCATCGCCGA CTCGCTGCAG CGCATTCCCG GCATCCAGAT CAAACGCGAC
GCCGGCGAGG GCGCGACGGT CAATATCCGC GGCCTGGCCC AGGTCATCAC CCTGCTGAAC
GGCGAGCAAT ATCTCAGCGC CGGCAACATG GGTTCGGCCC AGCCGAACCT GCTGGACGTG
CCCTCGCAGC TGATGAACCA GGTGCTGGTC TACAAGTCGA CCGATCCGAA GAACGCGCTG
TCGGGCATCA CCGGCACGAT CGACCTGCGC ACCCGCCGTC CGTTCCAGAT GGAGCAGGGC
CTGCAGATCG CCGGCGGCGT CGAAGGTCAG CGCGGCGAGC GCACCAAGGA CAACGATTAT
GTGATCAACG GCCTGGCCAG CTGGCGCAAT GAACGCGTCG GCCTGCTGGT CTCGGCCGCC
GCCAGCAAGG CGAACCTCGG CAACAACTCG TCCGGCGTCG TCGGCCTGTC GGGCAATAAC
GACTGGGGCG GCTCGGCCGC CAACAACTTC ATCTCGCCGC ATGGCTTCGA AAGCTTCCAC
CGCGAAGTCG AGCGCAAGCG TCTTGGCGTC AATGTGGCCT TCGAAGCCGA CCTGGGCGAG
GGTTTCACCC TGGTCGCCGA GGGCTTCTAC GCCAAGCTCG ACGAATATAA CCGCGCCGCC
GGCATCAATA TCTCCAACCG TTGGGACGGC GGCGCCTTCG GCGTCTGGAC CACCCCGACG
GTGTTCGAGA ACACCGGCCA GACCAGCGCC GGCAACGGCC GCCCGTGGGT GGCGGTCGAT
GAGTACGACA TCAACGCCTG GTGGGTGAAC AGCTTCGCGG TGAACCGCAC CACCAAGTCG
ACGACCAAGA ACTACAACCT CGAACTGAAG TACGACAACG GCGGCGCGTT CACGAGCGAA
GTGCGGGCCA TCCGCGCCAA CGGCAACCGT CTCAGCATGA ACGGCCAGGC CCAGGGCGAC
CTGAGCAACT GGCAGTACGC GCCCGGCCGC TTCAACCTGT TCCGGGATCC GGGCGACCGT
ACGCGCGGTC CGTTCTATCC CGCTTCGATC TGCGCCCAGT ATCCGACCTC GCAACGCAGC
AACGCCGTCG TCGGCAGCGC CGGCGGCTGC TACCTCAACC CCAACCCGCA AGGCTACGGC
GCCAACCCGC AGCTGCATTA CAATATCGGG GGCAACAAGG CGATCTGGAG CGGCTTCGAC
AATCCGCTGG CCGGCGGCCT GGGGGCGGGC AAGACCCTCA AGGACTACAT GGCCAACAAG
GACAGCTACG CGATCGCGGC GTTCTCCTCG GAAGGCAATA ACGAAATCGA CTCGGACATG
AACGTGTTCC GGGCCGAGGG TCACTACAAG TTCGACAACA AGTTCCTGGG CTTCATCACC
AAGATTGACG CCGGTGTCCG CCAGAGCGAC CGCACGGTCA ATGTCGAGGC CTTCCACCTG
TTCTCGCCGT TCTACGGCGG CACGCCGGGC GCGGTGCAGG CCAACGGCAC GCCGGTGCCG
GCCGCGGGCT GCTTCGCCCA GTGGAAAGCC ATCGACGTGG TCATGAACCA GGACCAGTGT
CAGGCTGGCG AGTTCGTGCC CAACCCCCTG GGCGGCGCTC CGGTGTTCCA GGGCTACACG
GTCAATCGTC CGACCAAGAT CGACGCCTAT AACAACGTGA TCTTCGAGAC CAACCTGGGC
AGCATCACCC AGGGCATCCC CGGCTTCTGG GTCGTCGATC CGCATGACTT CGACAACGTG
GCCGCCTTCC AGACCAAGGT GTTCGGCGCG GCGGTCCGCT ACCAGATCCC CGGCGCGACC
TACGACGTGA CCTTGAAGGA ACAAAGCGCC TACGGCGCGG CCAACTTCGA GATCGGCAAG
CTGTCGGGCA ACGTTGGCCT GCACGTCATC CAGAGCCACT TCCTGGTGAA GCAGAACCTG
ACGGGCGCCA CCCAGAACTA CGGCGACACC AACCTCGATG TCGGCGACAC GGTCACCAAC
CGCAAATACA CCGACTGGCT GCCGTCCTTG AACGCCGTCT ACGACTTCGA CGACCACCTG
AAGTTCCGCT TCGCCTATTC CAAGACCATG CAACCCTTGG ATCTGGGCAA CTACGGCGGC
GGCCTCAGCA TCTCGACCGC CGACTGCGGC ACCAAGCCCG GCCGTTGCGT GACGGGCGCC
AGCTCGTCGG GCAACCCCTA CCTGGATCCG TGGCGCTCGA CGAACTTCGA CGGCGCGATC
GAATACTACT TCGGCGGCGC CTCGATGGTG AACCTGTCGG CCTTCAAGCT GAAGATCGAC
AGCTTCGTCA CCGGCGGCAC CACCACCGGC ACGTTCAAGG ACGAGGACGG CACACCGCGC
ACGGTCAATG TCAGCCAGCC CATCCAGGGC GACGGCGGTT CGGTGAAGGG CGTCGAGGTC
GGCACGAAGC TGGCGTTCAG CGACCTGCTG ACGGATGGCG GCTTCTTCTC GAACTTCGGT
GTCGACGCCA ACGCCACCTA TTCGCCCAGC TCGGAGTCGC GCCTTGGTCT GGACGGCAAG
AAGCTGCCGT TCACCGACAA CTCCAAGTAC CAATACAATC TGATCGGCTG GTACCAGGAC
GACAAGTGGC AGGCCCGCGT GGCCTACAAT TATCGCACTG ACCGCCTGTC TAGCGTCTCG
GGAAGCTCGG GTAACAACCT GCCGATCTAT CAGGACGCCA CGGGCTTCGT GGACGTGAAC
CTCAGCTACA ACGTGCGCGA CAACATCGTC GTCTACGCGA ACGGCTCGAA TGTCACCGGC
GAGATCGAGA ATTACTACGT GAAGTTCGCG GACGGTAAGA CTCAGTACGC CAACCAGAAC
CAGTTCGAAC CCCGCTACAC CATCGGCATC CGCGCCAAGT GGTGA
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| Protein sequence | MSNPRNRSAL ARGMTLALLA GASSTALATG AWAQTAPDAG SQVEEVVVTG IRGSQMRSVD
VKRREASIVD AISSEDIGKL PDVTIADSLQ RIPGIQIKRD AGEGATVNIR GLAQVITLLN
GEQYLSAGNM GSAQPNLLDV PSQLMNQVLV YKSTDPKNAL SGITGTIDLR TRRPFQMEQG
LQIAGGVEGQ RGERTKDNDY VINGLASWRN ERVGLLVSAA ASKANLGNNS SGVVGLSGNN
DWGGSAANNF ISPHGFESFH REVERKRLGV NVAFEADLGE GFTLVAEGFY AKLDEYNRAA
GINISNRWDG GAFGVWTTPT VFENTGQTSA GNGRPWVAVD EYDINAWWVN SFAVNRTTKS
TTKNYNLELK YDNGGAFTSE VRAIRANGNR LSMNGQAQGD LSNWQYAPGR FNLFRDPGDR
TRGPFYPASI CAQYPTSQRS NAVVGSAGGC YLNPNPQGYG ANPQLHYNIG GNKAIWSGFD
NPLAGGLGAG KTLKDYMANK DSYAIAAFSS EGNNEIDSDM NVFRAEGHYK FDNKFLGFIT
KIDAGVRQSD RTVNVEAFHL FSPFYGGTPG AVQANGTPVP AAGCFAQWKA IDVVMNQDQC
QAGEFVPNPL GGAPVFQGYT VNRPTKIDAY NNVIFETNLG SITQGIPGFW VVDPHDFDNV
AAFQTKVFGA AVRYQIPGAT YDVTLKEQSA YGAANFEIGK LSGNVGLHVI QSHFLVKQNL
TGATQNYGDT NLDVGDTVTN RKYTDWLPSL NAVYDFDDHL KFRFAYSKTM QPLDLGNYGG
GLSISTADCG TKPGRCVTGA SSSGNPYLDP WRSTNFDGAI EYYFGGASMV NLSAFKLKID
SFVTGGTTTG TFKDEDGTPR TVNVSQPIQG DGGSVKGVEV GTKLAFSDLL TDGGFFSNFG
VDANATYSPS SESRLGLDGK KLPFTDNSKY QYNLIGWYQD DKWQARVAYN YRTDRLSSVS
GSSGNNLPIY QDATGFVDVN LSYNVRDNIV VYANGSNVTG EIENYYVKFA DGKTQYANQN
QFEPRYTIGI RAKW
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