Gene Caul_2090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2090 
Symbol 
ID5899545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2238937 
End bp2240145 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content70% 
IMG OID641562579 
Producttype II secretion system protein 
Protein accessionYP_001683716 
Protein GI167646053 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0804302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTACGT TCAACTATCG CGCCGTGACC GCGACTGGGG AGGTCCGCTC GGGCCTCCTG 
CTGGGCGCCT CGCGCGGGGA GGCAATGGAG CGCCTTCGGC GGTCCGGTCT CACCCCGATC
GACGCCAACG AGGTGGTCAC TAAGCCGACC AAGCCCCGGT CTGGCGGCGC GGCGGTGCGA
CGGGCGGTGG TCAATGCGAT AGGCGAGCTG GCGGTCTTGC TGGGTGCGGG CCTTTCGCTG
GATCGCGCCC TGGCGGTCTG CGTGGAGAAC GCGACCAATC CCACGCTCAA GGCGGCGCTG
GCTCAGGTGC AAAAACGTGT CCGGGAAGGC GCGCCGCTGT CGCGGGCCAT GACCGAGGCC
GGCGGCCTGT TCTCGCCGAT GGCGGCGGCC ATGGTCGAGG CGGGCGAGGC CGACGGCCGG
CTCTCCGTCG CCCTCTCGCG CCTGGGCGAA ACCCTTGATC GGGCCGAAGC CCTTCGCCAG
GTCGTGTCGT CCTCGATGAT CTACCCCGCC ATGCTGACGG TGGTGACCGG CGGGGTGATC
CTGATGATGC TGCTGTTCGT CGTGCCTCAG TTCGAGGGCC TGTTCGCCGA CAGCCCCACC
CAACTGCCCC TGGCGACCCG GATGGTCATG GGGGCCAGCC ATCTAACCCG AGCCTACGGC
CTGGCCATCC TGCTGGGCGG CGGCGTGACG GGCGTGGCGG TGTGGCGCTG GTTTCGGCGG
CCGGCCATGC GTCTGGCCCT CGACCGGTTC CTGCTGACCG TTCCGCGCCT GGGTCCGTTG
ATCAAGGTGG CCGAGACCTC GCGGTTCGCC CGCGTCCTGG GCAGTCTGGT CGAGGGCGGC
GTGCCCCTGC CCACCGCGCT GGGCATCGCG GGGAAGGCGC TGGCCAACAG TCACATGGCC
GCCGCCGTCG AACGGGTCAC CGCCGGCCTG AAGGAGGGGG GAGGCCTGAC CCGTCCCCTC
GCTGTCACGG GCCTGCTTCC TAGCGTGGCG ATCAGCTTCC TGCGCACGGG CGAGGAGACC
GCTCAGCTTC CGCTTATGCT CAACCGCCTC GCCGACGTGC TCGACCGCGA CGTGCGCACA
GCCCTGGCGC GCATCGTCGC GCTGCTGACC CCGGCGATTA CGATCGTCAT GGGCGGCGTC
GTCGCCGGTG TCATCGCCTC TATCATGTCT GCCATCCTCG GCTTCAACGA TATGGCCCTC
GCATCATGA
 
Protein sequence
MATFNYRAVT ATGEVRSGLL LGASRGEAME RLRRSGLTPI DANEVVTKPT KPRSGGAAVR 
RAVVNAIGEL AVLLGAGLSL DRALAVCVEN ATNPTLKAAL AQVQKRVREG APLSRAMTEA
GGLFSPMAAA MVEAGEADGR LSVALSRLGE TLDRAEALRQ VVSSSMIYPA MLTVVTGGVI
LMMLLFVVPQ FEGLFADSPT QLPLATRMVM GASHLTRAYG LAILLGGGVT GVAVWRWFRR
PAMRLALDRF LLTVPRLGPL IKVAETSRFA RVLGSLVEGG VPLPTALGIA GKALANSHMA
AAVERVTAGL KEGGGLTRPL AVTGLLPSVA ISFLRTGEET AQLPLMLNRL ADVLDRDVRT
ALARIVALLT PAITIVMGGV VAGVIASIMS AILGFNDMAL AS