Gene Caul_2033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2033 
Symbol 
ID5899488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2176600 
End bp2177385 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content67% 
IMG OID641562522 
Productconjugal transfer protein TrbF 
Protein accessionYP_001683659 
Protein GI167645996 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3701] Type IV secretory pathway, TrbF components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.54244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTTT CGCGCACGCC GCAACGCTAC GGGCTAACGC CGCCACCCGA GACGCCCTAC 
CAGGCCGCTG GCCAACTCTG GGACCAACGC ATCGGCTCCG CGCGCGTCCA GGCCCACAAC
TGGCGGCTGG CCTTCTTCGG CATGTTCGCG CTCAGCTGCG GACTGGCCGG CGGCAACGTC
CTGCAGGCCA CGCAAAGCAA GATCACCCCC TATGTCGTCG AGGTCGACCG GTTGGGTGAG
GTCCGGGCCG TGGGCCCTGC CGAACAGGAC TACCAGCCCA GCGATGCGGA GATCGCCCGC
GACCTTCGCC AGTTCATCGT CAATGTCAGA TCCCTGTCCT CCGACGGCGT GGTCGTGCGC
GAGCGTTGGA ACCAGGCCTA CGACTACGCC ACCAAGACCG GCCAGGTGTT CCTGGACACC
TATGCCCGGG GCGCGCAGCC GTTGCAGGAC TTCGGCCAGA AGACCGTCCT GGTGCAACCG
ACCAGCGTGG TGCGAGCCTC CAAGACCTCC TTCCAGGTCC GATGGACCGA GCAGACCTTC
GAGCGCGGCG CTCTGTCCAA GACCGAGCGC TGGACCGCGA TCCTCACGCT GAAGCGCCAG
AAACCCAAGA CCCGGGACCA GCTCCAGCGC AATCCGCTCG GTCTCTATGT CGACGGCGTC
GATTGGGCTC AAGAGGCCGA CAGCGCGTCC GCCGCTACGC CGCCTTCTTC GCCAACCTAT
CCGCCGACAA CGCCTGCTCC GACGTCGTCG CTGCTTCCTT CCATCCCCGG AGAGCCCCAG
CCATGA
 
Protein sequence
MRFSRTPQRY GLTPPPETPY QAAGQLWDQR IGSARVQAHN WRLAFFGMFA LSCGLAGGNV 
LQATQSKITP YVVEVDRLGE VRAVGPAEQD YQPSDAEIAR DLRQFIVNVR SLSSDGVVVR
ERWNQAYDYA TKTGQVFLDT YARGAQPLQD FGQKTVLVQP TSVVRASKTS FQVRWTEQTF
ERGALSKTER WTAILTLKRQ KPKTRDQLQR NPLGLYVDGV DWAQEADSAS AATPPSSPTY
PPTTPAPTSS LLPSIPGEPQ P