Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_2006 |
Symbol | |
ID | 5899461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 2151285 |
End bp | 2152496 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641562495 |
Product | integrase family protein |
Protein accession | YP_001683632 |
Protein GI | 167645969 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.128243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAA ACCTGAAAAC CTGCGTCGAG CCGTATCTGG CGGCGTTCGA GCAGACCTAT GCCGCAGAGA ACTACCAGAC TCGGACGATC ATCGCTTATC GGTGTCTGGC GAGGAAGTTC GGCGCGGTTC TGGACGAAGC GGGTATCGCA CCCCCGTCCG TAACCCTCGA CTGCGTCGAG CCGCTGACGC GCGACCTTCC AAGAGAGCGG AAGAATACAA TACGCCTCGA CACCATCGCG CGCCGGTTCG TCCAACACTT GGTCGATATC GGCGTGGCGC AGCCGGTACC GCTGACAGAC AGTGAGATCG CGCGTGCGAC TTTGCTGGCG GACTTCGAGA CTTATCTCGC CAAACAACGC GGCCTCAGTC CGCGCAGTAT TCCGCACTCG GTGGGTTTTG CGCGCCGCTT CCTCGACTAT CGGTTTGGCA AGGCATTGCC CGATCCGGGT CGCCTGTGCC CCGCCGACGT AATCGGCTTC ATGGAGCATG TGCTGGCCAG CGCGCGTCGC GACAAGACGG TGGCGACCCA CGTCCGTATC TTTCTTCAAT ACCTGTTCGC GCGCGGCGCG ACCGCGACCA ATCTGGCGCT GAGCGTTCCG AAGACGGCGA AACGCTGGGC TGCACGAATG CCGCGTCACT TGTCGCCCGA TGGTGTCGAG GCCGTGCTCG CGTCTGTTCG CGACAATCAC CTGCATGGTG CGCGGGATTA TGCGATGCTG TTGGTCATGG CCCGGCTCGG GCTGCGTGCG GCCGAGGTCG TCGCGATCCA ACTCGACGAT ATCGACTGGC GCGCGGGCGA ACTGATGGTG CGCGGCAAGG GCAAGCTGCA CGACCGTCTG CCGCTCACCG CGGAGGTCGG CGACGCGCTG AGCCGGTATC TTCGTGAGGA GCGAGGACCG GCGACCTGTC GCACGCTGTT CGTCGCACAT CGCGCGCCAC ATCGACCGTT CAAGGATGGG ACGATCGTCA ACGCCATCCT CAAAGATGCC TTGAAAGCGA CCGGCCAAAA GCCGGTGACG CCTTATGTGG GATCGCACCT GCTGCGTCAT AGCCTTGCCA CCCAACTGGT GAACACGGGT GCATCGCTCG ACGAAGTGGG TGACATGTTG CGACACCGAT CGCGGTCATC GACGATGATA TATGCGCGGC TCGACATCGA CGGGCTGCGG TCGATCGCGC AGCCCTGGCC GGTTGCGGGA GGCACGCTAT GA
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Protein sequence | MSENLKTCVE PYLAAFEQTY AAENYQTRTI IAYRCLARKF GAVLDEAGIA PPSVTLDCVE PLTRDLPRER KNTIRLDTIA RRFVQHLVDI GVAQPVPLTD SEIARATLLA DFETYLAKQR GLSPRSIPHS VGFARRFLDY RFGKALPDPG RLCPADVIGF MEHVLASARR DKTVATHVRI FLQYLFARGA TATNLALSVP KTAKRWAARM PRHLSPDGVE AVLASVRDNH LHGARDYAML LVMARLGLRA AEVVAIQLDD IDWRAGELMV RGKGKLHDRL PLTAEVGDAL SRYLREERGP ATCRTLFVAH RAPHRPFKDG TIVNAILKDA LKATGQKPVT PYVGSHLLRH SLATQLVNTG ASLDEVGDML RHRSRSSTMI YARLDIDGLR SIAQPWPVAG GTL
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