Gene Caul_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1873 
Symbol 
ID5899328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2009057 
End bp2010460 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content68% 
IMG OID641562363 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_001683500 
Protein GI167645837 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA CACTGAGACC CAAGGTTCTC GTCGTCGGTG GGGGACCGGG CGGCTATGTG 
GCCGCCATCC GCGCCGGACA GCTGGGGCTG GACACCGTGC TGGTCGAGAG CGGCCGGCTG
GGCGGCACTT GCCTGACGCG GGGCTGCATT CCTTCCAAGG CCCTGATCCA CGCCGCCGGC
CTGTACGAAG AGGCCGTCCT GGCAAGCGCC GAGATGGGCC GGTTCGGCAT CCACCTGAAC
CAGGCGCCGA CCCTGCGCTT CGACGAGACC GTCGGCTGGA AGGACGCCAT CGTCGAGCGG
CTCAGCGGCG GTGTCAGCGG GCTGTTGCGC AAGGCGAAGG TGCGGGCCAT GACCGGCTGG
GCGACCTTCT CCGACGCCAA GACCTGCACC GTCGAGACCG CCGAGGGCTT CGTCACGATC
CAGGCGGAAC ACGTGATCCT GGCCACGGGC TCGACCGCCG TCGAACTGCC GTTCCTGCCG
TTCGGCGGCC GGGTGATCTC CTCCACCGAG GCGCTGTGCC TGCCTGAGGT CCCGGCGACC
CTGGCGGTGG TCGGCGGCGG CTATATCGGC CTGGAGCTCG GCATCGCCTT CGCCAAGCTG
GGCTCGAAGG TCACCATCGT CGAGGCGACG GACCGCCTTC TGCCGCTCTA CGACGCTCAA
TTGACCGCGC CGGTCTCGCG GTGGCTCGAA AAGCATGGTG TCACGGTTCA TCTCGGCGCG
AAGGCCTTGG GCCAGGACGA GGAGGGCCTG TTGATTCAGA CGGCGGGCGG CAAGAGCCAG
TTGGTCGTGC CCGCGGAGCG CATTCTCGTC ACCGTGGGCC GCAAGCCCCA GACCGAAGGT
TGGGGGCTGG AGCAGGCGGC GCTGGCGATG GAAGGACGCT TCGTGAAGGT CGACGACCGC
TGCGCGACGT CCACCACCAA CGTCTGGGCC ATCGGCGATC TGGTTGGCGA GCCGATGCTG
GCGCACAAGG CGTCGGCCCA GGGGGAGATG GTCGCCGAGA TCATCGCGGG TCACCGGCGA
CGGTTCGACC CGGTCGCCAT CGCCGCGGTC TGTTTCACCG AACCAGAGAT TGTCAGCGTC
GGCCTTCTGC CCGACCAGGC TCCCGAAGGC GTCGAGACCA TCGTCGGTCA ATTCCCGTTC
CAGGCCAACG GCCGCGCCCT GTCGATGCAG GCCGGGGACG ACGGCGGTTT CGTCCGGATC
CTCGCCCGCA AGTCCGATCA TCGGATTCTC GGCGTCCAGG CCGTGGGTCG CCACTGCTCC
GAATTCGCGG GCGAGTTCGC CACCCTGATG GAGATGGGGG CGGTTCTGGA AGACGTCGCC
GGCGTCATCC ACGTCCATCC CACCCTGGGC GAAGCCATCC ACGAGAGCGC TCTGAAGGCG
CTCGGCCACG CCATCCACAT TTGA
 
Protein sequence
MTETLRPKVL VVGGGPGGYV AAIRAGQLGL DTVLVESGRL GGTCLTRGCI PSKALIHAAG 
LYEEAVLASA EMGRFGIHLN QAPTLRFDET VGWKDAIVER LSGGVSGLLR KAKVRAMTGW
ATFSDAKTCT VETAEGFVTI QAEHVILATG STAVELPFLP FGGRVISSTE ALCLPEVPAT
LAVVGGGYIG LELGIAFAKL GSKVTIVEAT DRLLPLYDAQ LTAPVSRWLE KHGVTVHLGA
KALGQDEEGL LIQTAGGKSQ LVVPAERILV TVGRKPQTEG WGLEQAALAM EGRFVKVDDR
CATSTTNVWA IGDLVGEPML AHKASAQGEM VAEIIAGHRR RFDPVAIAAV CFTEPEIVSV
GLLPDQAPEG VETIVGQFPF QANGRALSMQ AGDDGGFVRI LARKSDHRIL GVQAVGRHCS
EFAGEFATLM EMGAVLEDVA GVIHVHPTLG EAIHESALKA LGHAIHI