Gene Caul_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1797 
Symbol 
ID5899252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1899630 
End bp1900451 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content68% 
IMG OID641562287 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001683424 
Protein GI167645761 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.41974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0188791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGG CCGACTGCCG TATCCTCCTC CTCGGCGCGG TCGGCGGCAT CGGCTCGGCC 
ATCCGCGAAG GCCTGCGCGA CCGCTACGGC CTGATGCGCC TGTCAGACAT CGCGCCTCTG
ACGCCGGCGG GGCAGGGCGA GGAAGCCGTC CAAGCCGACC TGCTCGACAT CCCGTCCCTG
GTCGCGGCCA TGACCGGGAT CGACACCGTC GTCCACATGG CCGGCGTGCC GGTCGAACCC
GAGACCCACG CCTGGGATCA GGTGCTGCCG GCCAACATCG TCGGCGTCCA CAACCTGTTC
GAGGCCGCTC GATTGGCCGG GGTAAAACGG GTGCTGTTCG CCTCGTCGCA CCACGCGGCG
GGATTCCACC GCCGCGACAC GCCGACGGCG GAGACGATGG TCCCGCGTCC CGACAGCTAT
TACGGCGTCA GCAAGGTGTT CGGCGAAGCC ATGGGCCGGA TGTACGCTGA CAAGTTCGGG
CTGCAGGTGC TGAGCCTGCG GATCGGCGCC TATCGCGAGC GGCCATCGGA CCCCCGCCAG
CTGGCGGTCT GGATCAGCCC GCGCGACATG GTTGAACTGG TCCGCTGCGG GATCGAGGCG
CCGGATTTCG GCTATGCGAC CGTGTACGGC GTTTCGAACA ATGCGCGGAA GTTCTGGGAC
AATTCGGCGG CGGCGTTTCT GGGCTACGCG CCCGTCGACA ACGCCGAGGA CTGGGCGGCG
GAGGTGCTGG CGGGTGGTGT GGAGGATGCG GTCGCCGCGC CTTTCCAGGG CGGCTGGTAT
TGCGCCAAGA ACTTCGTGGG GGATGTGGGA CGGGTGGGCT GA
 
Protein sequence
MKLADCRILL LGAVGGIGSA IREGLRDRYG LMRLSDIAPL TPAGQGEEAV QADLLDIPSL 
VAAMTGIDTV VHMAGVPVEP ETHAWDQVLP ANIVGVHNLF EAARLAGVKR VLFASSHHAA
GFHRRDTPTA ETMVPRPDSY YGVSKVFGEA MGRMYADKFG LQVLSLRIGA YRERPSDPRQ
LAVWISPRDM VELVRCGIEA PDFGYATVYG VSNNARKFWD NSAAAFLGYA PVDNAEDWAA
EVLAGGVEDA VAAPFQGGWY CAKNFVGDVG RVG