Gene Caul_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1793 
Symbol 
ID5899248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1896003 
End bp1896650 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content69% 
IMG OID641562283 
Productisochorismatase hydrolase 
Protein accessionYP_001683420 
Protein GI167645757 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.130883 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGA CCGTGGAAGC CTCCGACGAC CTGGCCGGCT GGATCGCGCC GGGTCGCACG 
GCGGTGCTGG TCATCGACAT GCAGGTCGAC TTCGCCTCGC CCGACGGCGT GCTGGGGGGC
TTCATCGACA TGAGCGTGGT CGAGCCGGCC GTGACGGCGG CTGAAAAGCT GGTCGCCGAC
GCCCGCGCGG CCGGCGTGCC GGTGGTGTTC ATCGGCCTGT CGACCACGCC GGAGACGGAC
TCACCGGCCT GGAACGAGCG CATGCGGCGG CGTGGCGGCG ATCCGGATGT CGATGCGGCC
TTGTGCCGGA CGGGGCAGGT CGGTTCGGAA TTCTACGGAC CCAAGCCCCA GCCGGGTGAA
CTGGTGGTGC TGAAGACCCG CTACAGTGGC TTTGTCGGCA CCGATCTGGA CATGCAGCTG
ACCAAGCTGG GCGTCGACAC CCTGGTGGTC GCCGGCCTGA CCACCGAGTG CTGTGTCGGG
GGCACCGTCC AGGACGCCTT CCACCTCGAC TACCACGTGT TCGTCGCCGC CGACGCCTGC
GCCGCCTACG AGGCGGACAT CCATGAGGCG TCGCTGAAGG TGATGGAACT GAACAGCGCG
ATCCTGACCG ACACGGCCGC GGTGGCGGCG GCATGGGCGG TCAAATGA
 
Protein sequence
MSPTVEASDD LAGWIAPGRT AVLVIDMQVD FASPDGVLGG FIDMSVVEPA VTAAEKLVAD 
ARAAGVPVVF IGLSTTPETD SPAWNERMRR RGGDPDVDAA LCRTGQVGSE FYGPKPQPGE
LVVLKTRYSG FVGTDLDMQL TKLGVDTLVV AGLTTECCVG GTVQDAFHLD YHVFVAADAC
AAYEADIHEA SLKVMELNSA ILTDTAAVAA AWAVK